Variant report

Variant	rs73273774
Chromosome Location	chr8:69822190-69822191
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10091250	0.82[ASN][1000 genomes]
rs10091347	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10095921	0.81[EUR][1000 genomes]
rs10100825	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10101976	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10104083	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10104452	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16919116	0.82[ASN][1000 genomes]
rs16935184	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4474011	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55711798	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs60141621	0.82[ASN][1000 genomes]
rs6472424	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6472427	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6472428	0.96[EUR][1000 genomes]
rs6981271	0.81[EUR][1000 genomes]
rs6987520	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7014621	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73277058	0.81[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs73683758	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73683764	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7460149	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7464267	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7815951	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7821207	0.96[EUR][1000 genomes]
rs7821991	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7822932	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7823746	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7825981	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7831860	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7832452	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7838608	0.83[EUR][1000 genomes]
rs7838741	0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033122	chr8:69728620-69843088	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1031633	chr8:69766575-70322790	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69808000-69833000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:69818200-69824800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:69820800-69824600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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