Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:28531413..28534282-chr6:28574437..28577006,3	K562	blood:
2	chr6:28508020..28511004-chr6:28575052..28576613,2	K562	blood:
3	chr6:28544718..28546590-chr6:28574487..28576420,2	K562	blood:
4	chr6:28519932..28522459-chr6:28575333..28577589,2	K562	blood:
5	chr6:28500567..28502083-chr6:28573952..28576413,2	K562	blood:

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1015810	0.83[ASN][1000 genomes]
rs11962141	0.91[EUR][1000 genomes]
rs11964748	0.91[EUR][1000 genomes]
rs11966949	0.81[EUR][1000 genomes]
rs11968771	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11969304	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11970404	0.83[ASN][1000 genomes]
rs2078422	0.83[ASN][1000 genomes]
rs2531802	0.83[ASN][1000 genomes]
rs2531819	0.83[ASN][1000 genomes]
rs28382592	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2859349	0.83[ASN][1000 genomes]
rs2859350	0.83[ASN][1000 genomes]
rs2859354	0.83[ASN][1000 genomes]
rs385908	0.83[ASN][1000 genomes]
rs400987	0.83[ASN][1000 genomes]
rs403774	0.83[ASN][1000 genomes]
rs423118	0.83[ASN][1000 genomes]
rs57083092	0.91[EUR][1000 genomes]
rs57147168	0.81[EUR][1000 genomes]
rs58945456	0.91[EUR][1000 genomes]
rs61540948	0.83[ASN][1000 genomes]
rs6923104	0.91[EUR][1000 genomes]
rs73391136	0.83[ASN][1000 genomes]
rs73391164	0.83[ASN][1000 genomes]
rs73391166	0.83[ASN][1000 genomes]
rs73391169	0.83[ASN][1000 genomes]
rs73402995	0.91[EUR][1000 genomes]
rs73403142	0.83[ASN][1000 genomes]
rs73404956	0.91[EUR][1000 genomes]
rs73405002	0.91[EUR][1000 genomes]
rs73407126	0.83[ASN][1000 genomes]
rs73409123	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs73409134	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7742658	0.91[EUR][1000 genomes]
rs7751604	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020689	chr6:28449137-28635171	Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv830621	chr6:28473951-28675709	Bivalent/Poised TSS Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
3	nsv1031671	chr6:28575172-28678126	Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv970735	chr6:28575590-28581635	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28575400-28576400	Flanking Active TSS	K562	blood

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