Variant report

Variant	rs74064796
Chromosome Location	chr14:81451102-81451103
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 63 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs10139168	0.81[AFR][1000 genomes]
rs11845052	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11847808	0.81[AFR][1000 genomes]
rs11850464	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11850795	0.81[AFR][1000 genomes]
rs11850934	0.81[AFR][1000 genomes]
rs12050078	0.96[EUR][1000 genomes]
rs12050350	0.96[EUR][1000 genomes]
rs12437005	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12896769	0.89[ASN][1000 genomes]
rs17544968	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17545038	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17545310	0.87[ASN][1000 genomes]
rs179243	0.81[ASN][1000 genomes]
rs179245	0.81[ASN][1000 genomes]
rs179249	0.93[ASN][1000 genomes]
rs179251	0.93[ASN][1000 genomes]
rs179254	0.87[ASN][1000 genomes]
rs179257	0.95[ASN][1000 genomes]
rs1990597	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2024427	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2110696	0.92[ASN][1000 genomes]
rs2239610	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2268452	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2268457	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2268458	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2268460	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2284718	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2284719	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2284720	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2284722	0.94[ASN][1000 genomes]
rs2284727	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28685026	0.81[AFR][1000 genomes]
rs3783945	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3783951	0.95[ASN][1000 genomes]
rs4903958	0.95[ASN][1000 genomes]
rs4903959	0.95[ASN][1000 genomes]
rs5002906	0.94[ASN][1000 genomes]
rs55751898	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55945219	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59431750	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59711583	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs724169	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs726018	0.80[ASN][1000 genomes]
rs726020	0.80[ASN][1000 genomes]
rs72693057	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72693068	0.94[ASN][1000 genomes]
rs72693069	0.94[ASN][1000 genomes]
rs72693070	0.94[ASN][1000 genomes]
rs72693072	0.94[ASN][1000 genomes]
rs72693073	0.94[ASN][1000 genomes]
rs72693075	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72693078	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72693080	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72693090	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72693093	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72693096	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs74064786	0.81[AFR][1000 genomes]
rs74064794	0.81[AFR][1000 genomes]
rs917985	0.90[ASN][1000 genomes]
rs929630	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv2761847	chr14:81392124-81453137	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81448000-81453400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr14:81448000-81453400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr14:81449200-81452600	Enhancers	Thymus	Thymus
4	chr14:81450800-81454400	Enhancers	Fetal Thymus	thymus
5	chr14:81451000-81455400	Enhancers	Dnd41	blood

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