Variant report

Variant	rs74098454
Chromosome Location	chr1:85173947-85173948
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:85151664..85154712-chr1:85171325..85174497,4	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs11163998	1.00[EUR][1000 genomes]
rs11164002	1.00[EUR][1000 genomes]
rs11164013	1.00[EUR][1000 genomes]
rs11164022	1.00[EUR][1000 genomes]
rs11164024	1.00[EUR][1000 genomes]
rs11164025	1.00[EUR][1000 genomes]
rs11807815	1.00[EUR][1000 genomes]
rs12058889	1.00[EUR][1000 genomes]
rs12058978	1.00[EUR][1000 genomes]
rs12059657	1.00[EUR][1000 genomes]
rs12062111	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12068340	1.00[EUR][1000 genomes]
rs12070049	1.00[EUR][1000 genomes]
rs12075688	1.00[EUR][1000 genomes]
rs12076236	1.00[EUR][1000 genomes]
rs12077315	1.00[EUR][1000 genomes]
rs12080425	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12084716	1.00[EUR][1000 genomes]
rs12091312	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12092806	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12093770	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12095492	1.00[EUR][1000 genomes]
rs12095537	1.00[EUR][1000 genomes]
rs12096153	1.00[EUR][1000 genomes]
rs1591972	1.00[EUR][1000 genomes]
rs1803276	1.00[EUR][1000 genomes]
rs28667025	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28706082	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2945131	1.00[EUR][1000 genomes]
rs2945132	1.00[EUR][1000 genomes]
rs2994926	1.00[EUR][1000 genomes]
rs2994927	1.00[EUR][1000 genomes]
rs59323332	1.00[AMR][1000 genomes]
rs60192023	1.00[AMR][1000 genomes]
rs6665333	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6669324	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72950312	1.00[EUR][1000 genomes]
rs74096103	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74098423	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74098426	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74098430	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74098433	1.00[AMR][1000 genomes]
rs74098441	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74098442	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74098443	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74098453	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7517977	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7532040	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7544392	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9661833	1.00[EUR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85165200-85179000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr1:85167600-85177000	Weak transcription	Aorta	Aorta
3	chr1:85168400-85176800	Weak transcription	Rectal Smooth Muscle	rectum
4	chr1:85168600-85175400	Weak transcription	Colon Smooth Muscle	Colon
5	chr1:85168600-85176400	Weak transcription	Fetal Stomach	stomach
6	chr1:85169600-85175000	Enhancers	Fetal Intestine Large	intestine
7	chr1:85170000-85177400	Weak transcription	Fetal Brain Female	brain
8	chr1:85171400-85176800	Weak transcription	Fetal Lung	lung
9	chr1:85171600-85174200	Weak transcription	K562	blood
10	chr1:85171600-85177000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr1:85171600-85184400	Weak transcription	Fetal Kidney	kidney
12	chr1:85172800-85174200	Weak transcription	Fetal Intestine Small	intestine
13	chr1:85173400-85174400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr1:85173800-85174000	Enhancers	Stomach Smooth Muscle	stomach
15	chr1:85173800-85174200	Enhancers	NHLF	lung
16	chr1:85173800-85174200	Enhancers	Osteobl	bone

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