Variant report

Variant	rs9661833
Chromosome Location	chr1:85215258-85215259
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:85214466..85216211-chr1:85223596..85226485,2	K562	blood:
2	chr1:85209877..85212945-chr1:85214926..85217503,3	K562	blood:

rs_ID	r²[population]
rs11163998	1.00[EUR][1000 genomes]
rs11164002	1.00[EUR][1000 genomes]
rs11164013	1.00[EUR][1000 genomes]
rs11164022	1.00[EUR][1000 genomes]
rs11164024	1.00[EUR][1000 genomes]
rs11164025	1.00[EUR][1000 genomes]
rs11807815	1.00[EUR][1000 genomes]
rs12058889	1.00[EUR][1000 genomes]
rs12058978	1.00[EUR][1000 genomes]
rs12059657	1.00[EUR][1000 genomes]
rs12062111	1.00[TSI][hapmap]
rs12068340	1.00[EUR][1000 genomes]
rs12070049	1.00[EUR][1000 genomes]
rs12075688	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12076236	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12077315	1.00[EUR][1000 genomes]
rs12080425	1.00[EUR][1000 genomes]
rs12084716	1.00[EUR][1000 genomes]
rs12091312	1.00[EUR][1000 genomes]
rs12092806	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12093770	1.00[EUR][1000 genomes]
rs12095492	1.00[EUR][1000 genomes]
rs12095537	1.00[EUR][1000 genomes]
rs12096153	1.00[EUR][1000 genomes]
rs1591972	0.83[YRI][hapmap];0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1803276	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs28667025	1.00[EUR][1000 genomes]
rs28706082	1.00[EUR][1000 genomes]
rs2945131	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs2945132	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs2994926	1.00[EUR][1000 genomes]
rs2994927	1.00[EUR][1000 genomes]
rs6665333	1.00[EUR][1000 genomes]
rs6669324	1.00[EUR][1000 genomes]
rs72950312	1.00[EUR][1000 genomes]
rs74096103	1.00[EUR][1000 genomes]
rs74098423	1.00[EUR][1000 genomes]
rs74098426	1.00[EUR][1000 genomes]
rs74098430	1.00[EUR][1000 genomes]
rs74098441	1.00[EUR][1000 genomes]
rs74098442	1.00[EUR][1000 genomes]
rs74098443	1.00[EUR][1000 genomes]
rs74098453	1.00[EUR][1000 genomes]
rs74098454	1.00[EUR][1000 genomes]
rs7517977	1.00[TSI][hapmap]
rs7532040	1.00[EUR][1000 genomes]
rs7544392	1.00[EUR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85204200-85230400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:85207600-85219000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr1:85209600-85215800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr1:85212000-85222600	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:85213200-85216600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr1:85213800-85215400	Enhancers	Fetal Intestine Small	intestine
7	chr1:85214000-85217000	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr1:85214200-85215800	Weak transcription	Placenta	Placenta
9	chr1:85214400-85219000	Weak transcription	Fetal Intestine Large	intestine
10	chr1:85214600-85215800	Enhancers	HMEC	breast
11	chr1:85214600-85216800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr1:85214600-85217000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr1:85214600-85217600	Enhancers	Fetal Brain Male	brain
14	chr1:85214600-85218800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr1:85214600-85219000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr1:85215000-85215600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr1:85215200-85215400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr1:85215200-85215400	Enhancers	Esophagus	oesophagus
19	chr1:85215200-85215400	Enhancers	K562	blood
20	chr1:85215200-85216000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr1:85215200-85216000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr1:85215200-85216000	Enhancers	Fetal Brain Female	brain
23	chr1:85215200-85216000	Flanking Active TSS	NHEK	skin

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