Variant report
| Variant | rs12093770 |
|---|---|
| Chromosome Location | chr1:85113562-85113563 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:85087000-85147400 | Weak transcription | Gastric | stomach |
| 2 | chr1:85099000-85115600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 3 | chr1:85099000-85123400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 4 | chr1:85099200-85115000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 5 | chr1:85099200-85121400 | Weak transcription | NHDF-Ad | bronchial |
| 6 | chr1:85099200-85138200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr1:85099400-85115000 | Weak transcription | Osteobl | bone |
| 8 | chr1:85099400-85131200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 9 | chr1:85099600-85122600 | Weak transcription | Fetal Brain Male | brain |
| 10 | chr1:85100600-85116800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 11 | chr1:85101000-85123200 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr1:85101000-85124400 | Weak transcription | Hela-S3 | cervix |
| 13 | chr1:85101600-85121000 | Weak transcription | Placenta | Placenta |
| 14 | chr1:85103000-85115000 | Weak transcription | HMEC | breast |
| 15 | chr1:85104600-85116000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 16 | chr1:85105000-85119000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 17 | chr1:85105800-85115000 | Weak transcription | Small Intestine | intestine |
| 18 | chr1:85106000-85116600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 19 | chr1:85106200-85115000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 20 | chr1:85106200-85140400 | Weak transcription | NHEK | skin |
| 21 | chr1:85106400-85114800 | Weak transcription | Fetal Brain Female | brain |
| 22 | chr1:85106400-85155400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 23 | chr1:85106600-85114800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 24 | chr1:85106600-85116800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 25 | chr1:85107600-85114800 | Weak transcription | Primary B cells from cord blood | blood |
| 26 | chr1:85107600-85115000 | Weak transcription | Primary T cells from cord blood | blood |
| 27 | chr1:85107800-85115400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 28 | chr1:85108000-85123200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 29 | chr1:85108000-85155000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 30 | chr1:85108200-85115000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 31 | chr1:85108200-85119000 | Weak transcription | Right Ventricle | heart |
| 32 | chr1:85108200-85123400 | Weak transcription | Esophagus | oesophagus |
| 33 | chr1:85108200-85128800 | Weak transcription | GM12878-XiMat | blood |
| 34 | chr1:85108400-85115000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 35 | chr1:85108400-85115200 | Weak transcription | Brain Anterior Caudate | brain |
| 36 | chr1:85108400-85121400 | Weak transcription | Left Ventricle | heart |
| 37 | chr1:85108400-85121600 | Weak transcription | Brain Germinal Matrix | brain |
| 38 | chr1:85108600-85114800 | Weak transcription | Brain Substantia Nigra | brain |
| 39 | chr1:85108600-85116000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 40 | chr1:85108800-85114800 | Weak transcription | Colon Smooth Muscle | Colon |
| 41 | chr1:85108800-85114800 | Weak transcription | Dnd41 | blood |
| 42 | chr1:85109000-85116400 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 43 | chr1:85109000-85121200 | Weak transcription | HSMMtube | muscle |
| 44 | chr1:85109200-85114800 | Weak transcription | Fetal Muscle Leg | muscle |
| 45 | chr1:85109200-85133000 | Weak transcription | Pancreas | Pancrea |
| 46 | chr1:85109400-85116000 | Weak transcription | Thymus | Thymus |
| 47 | chr1:85109600-85114600 | Weak transcription | Brain Hippocampus Middle | brain |
| 48 | chr1:85109600-85114800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 49 | chr1:85109600-85115800 | Weak transcription | Fetal Lung | lung |
| 50 | chr1:85109600-85123200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
