Variant report

Variant	rs7912022
Chromosome Location	chr10:92750624-92750625
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs17103779	0.88[ASN][1000 genomes]
rs17456916	0.80[EUR][1000 genomes]
rs17535998	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17536094	0.80[EUR][1000 genomes]
rs55863711	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs55886424	1.00[ASN][1000 genomes]
rs56075405	0.83[EUR][1000 genomes]
rs56226914	0.83[EUR][1000 genomes]
rs56242242	1.00[ASN][1000 genomes]
rs56285679	1.00[ASN][1000 genomes]
rs56342917	1.00[ASN][1000 genomes]
rs56374954	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56954792	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61857869	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61857871	0.84[EUR][1000 genomes]
rs61859572	0.82[EUR][1000 genomes]
rs61859574	0.81[EUR][1000 genomes]
rs61859575	0.85[EUR][1000 genomes]
rs61859576	0.84[EUR][1000 genomes]
rs61859580	0.83[EUR][1000 genomes]
rs61859604	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61859605	0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61859606	0.95[EUR][1000 genomes]
rs61859607	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61859608	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61859609	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61859610	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61859611	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61859612	1.00[ASN][1000 genomes]
rs61859613	1.00[ASN][1000 genomes]
rs61859614	1.00[ASN][1000 genomes]
rs61859616	1.00[ASN][1000 genomes]
rs61859617	1.00[ASN][1000 genomes]
rs61859618	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7083785	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7083909	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7906136	0.91[ASN][1000 genomes]
rs7914213	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831945	chr10:92590576-92793582	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:92744200-92752000	Weak transcription	GM12878-XiMat	blood
2	chr10:92744200-92766200	Weak transcription	Right Ventricle	heart
3	chr10:92746600-92753600	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr10:92748000-92755200	Enhancers	Dnd41	blood
5	chr10:92748000-92758600	Weak transcription	Right Atrium	heart
6	chr10:92749400-92753600	Weak transcription	Left Ventricle	heart
7	chr10:92749800-92753800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr10:92749800-92753800	Weak transcription	Thymus	Thymus
9	chr10:92750600-92753600	Weak transcription	Fetal Thymus	thymus

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