The 2.0 version of rSNPBase

Variant report

Variant rs7940620
Chromosome Location chr11:46131071-46131072
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46106400-46131800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr11:46119000-46131200 Weak transcription Esophagus oesophagus
3 chr11:46121800-46139200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr11:46122000-46139600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr11:46122600-46131200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr11:46122600-46135400 Weak transcription Primary B cells from cord blood blood
7 chr11:46122600-46140400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr11:46122600-46140400 Weak transcription Stomach Smooth Muscle stomach
9 chr11:46122800-46134200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr11:46122800-46134200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr11:46122800-46134400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr11:46123400-46137400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr11:46123800-46138200 Weak transcription Primary T cells fromperipheralblood blood
14 chr11:46126200-46134200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr11:46127000-46133400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr11:46127000-46134400 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr11:46127000-46135800 Weak transcription Left Ventricle heart
18 chr11:46127000-46139400 Weak transcription NHEK skin
19 chr11:46127000-46140000 Weak transcription Osteobl bone
20 chr11:46127000-46140800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr11:46127000-46140800 Weak transcription Pancreas Pancrea
22 chr11:46127200-46131200 Weak transcription Psoas Muscle Psoas
23 chr11:46127200-46132800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr11:46127200-46133000 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr11:46127200-46133600 Weak transcription GM12878-XiMat blood
26 chr11:46127200-46134200 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr11:46127200-46134200 Weak transcription Liver Liver
28 chr11:46127200-46134400 Weak transcription Primary T cells from cord blood blood
29 chr11:46127200-46135800 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr11:46127200-46136000 Weak transcription Dnd41 blood
31 chr11:46127200-46138200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr11:46127200-46139600 Weak transcription Right Atrium heart
33 chr11:46127200-46140600 Weak transcription Small Intestine intestine
34 chr11:46128000-46134400 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr11:46128200-46131200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr11:46128400-46131200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr11:46128400-46134400 Weak transcription Muscle Satellite Cultured Cells --
38 chr11:46128400-46134400 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr11:46128400-46134600 Weak transcription Brain Germinal Matrix brain
40 chr11:46128400-46138800 Weak transcription NHDF-Ad bronchial
41 chr11:46128400-46139400 Weak transcription Thymus Thymus
42 chr11:46128600-46132400 Weak transcription Lung lung
43 chr11:46128600-46134000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr11:46128600-46134200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr11:46128600-46134200 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr11:46128600-46134200 Weak transcription Brain Inferior Temporal Lobe brain
47 chr11:46128600-46134600 Weak transcription Primary monocytes fromperipheralblood blood
48 chr11:46128600-46135600 Weak transcription Ovary ovary
49 chr11:46128600-46138200 Weak transcription Spleen Spleen
50 chr11:46128600-46139800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015