The 2.0 version of rSNPBase

Variant report

Variant rs61882547
Chromosome Location chr11:46062000-46062001
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
2 chr11:46012800-46062800 Weak transcription GM12878-XiMat blood
3 chr11:46022000-46074600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr11:46035200-46062000 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr11:46039200-46077200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr11:46039400-46096800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr11:46041000-46066200 Weak transcription Liver Liver
8 chr11:46041000-46071000 Weak transcription Placenta Placenta
9 chr11:46041200-46070800 Weak transcription Thymus Thymus
10 chr11:46041400-46086600 Weak transcription Fetal Intestine Large intestine
11 chr11:46042000-46065000 Weak transcription Pancreas Pancrea
12 chr11:46042000-46071000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr11:46042000-46071000 Weak transcription Brain Angular Gyrus brain
14 chr11:46043200-46071000 Weak transcription Lung lung
15 chr11:46043200-46086800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr11:46043800-46062400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr11:46044400-46071000 Weak transcription Fetal Muscle Trunk muscle
18 chr11:46044400-46071200 Weak transcription Fetal Intestine Small intestine
19 chr11:46045000-46070600 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr11:46045000-46087000 Weak transcription Hela-S3 cervix
21 chr11:46048000-46070400 Weak transcription Primary B cells from peripheral blood blood
22 chr11:46048600-46070600 Weak transcription Fetal Muscle Leg muscle
23 chr11:46048800-46063800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr11:46049200-46071000 Weak transcription Fetal Brain Male brain
25 chr11:46049200-46078800 Weak transcription Aorta Aorta
26 chr11:46049400-46067200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr11:46049400-46068400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr11:46049400-46071000 Weak transcription HSMM muscle
29 chr11:46049600-46069200 Weak transcription HSMMtube muscle
30 chr11:46053200-46071000 Weak transcription Gastric stomach
31 chr11:46055400-46066200 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr11:46055400-46070400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr11:46055600-46062600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr11:46056400-46067600 Weak transcription Psoas Muscle Psoas
35 chr11:46056800-46062000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr11:46057400-46071000 Weak transcription NHDF-Ad bronchial
37 chr11:46057600-46063600 Weak transcription Primary monocytes fromperipheralblood blood
38 chr11:46059200-46071000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr11:46059800-46062000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr11:46060600-46067600 Weak transcription Left Ventricle heart
41 chr11:46060800-46062800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr11:46061000-46062200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr11:46061000-46062200 Enhancers Duodenum Smooth Muscle Duodenum
44 chr11:46061000-46062400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr11:46061000-46063800 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr11:46061200-46062200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr11:46061200-46062400 Enhancers Osteobl bone
48 chr11:46061200-46062600 Enhancers Muscle Satellite Cultured Cells --
49 chr11:46061200-46062600 Enhancers Fetal Lung lung
50 chr11:46061400-46062000 Enhancers NH-A brain

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Last update: Aug 31, 2015