The 2.0 version of rSNPBase

Variant report

Variant rs61882545
Chromosome Location chr11:46060526-46060527
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
2 chr11:46012800-46062800 Weak transcription GM12878-XiMat blood
3 chr11:46022000-46074600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr11:46034800-46061800 Weak transcription Primary T cells fromperipheralblood blood
5 chr11:46035200-46061800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr11:46035200-46062000 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr11:46035400-46060800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr11:46039200-46077200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr11:46039400-46096800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr11:46041000-46061400 Weak transcription Adipose Nuclei Adipose
11 chr11:46041000-46066200 Weak transcription Liver Liver
12 chr11:46041000-46071000 Weak transcription Placenta Placenta
13 chr11:46041200-46070800 Weak transcription Thymus Thymus
14 chr11:46041400-46086600 Weak transcription Fetal Intestine Large intestine
15 chr11:46042000-46061600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr11:46042000-46061600 Weak transcription Ovary ovary
17 chr11:46042000-46065000 Weak transcription Pancreas Pancrea
18 chr11:46042000-46071000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:46042000-46071000 Weak transcription Brain Angular Gyrus brain
20 chr11:46043200-46071000 Weak transcription Lung lung
21 chr11:46043200-46086800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr11:46043600-46061800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr11:46043800-46062400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr11:46044400-46071000 Weak transcription Fetal Muscle Trunk muscle
25 chr11:46044400-46071200 Weak transcription Fetal Intestine Small intestine
26 chr11:46045000-46070600 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr11:46045000-46087000 Weak transcription Hela-S3 cervix
28 chr11:46048000-46070400 Weak transcription Primary B cells from peripheral blood blood
29 chr11:46048600-46061200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr11:46048600-46070600 Weak transcription Fetal Muscle Leg muscle
31 chr11:46048800-46063800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr11:46049200-46061400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr11:46049200-46071000 Weak transcription Fetal Brain Male brain
34 chr11:46049200-46078800 Weak transcription Aorta Aorta
35 chr11:46049400-46061600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr11:46049400-46061800 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr11:46049400-46067200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr11:46049400-46068400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr11:46049400-46071000 Weak transcription HSMM muscle
40 chr11:46049600-46069200 Weak transcription HSMMtube muscle
41 chr11:46050000-46061000 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr11:46053200-46061400 Weak transcription Brain Hippocampus Middle brain
43 chr11:46053200-46061600 Weak transcription Colon Smooth Muscle Colon
44 chr11:46053200-46071000 Weak transcription Gastric stomach
45 chr11:46053600-46061200 Weak transcription Fetal Lung lung
46 chr11:46053600-46061600 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr11:46055400-46066200 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr11:46055400-46070400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr11:46055600-46062600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr11:46055800-46061200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015