The 2.0 version of rSNPBase

Variant report

Variant rs2959104
Chromosome Location chr11:46065036-46065037
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
2 chr11:46022000-46074600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr11:46039200-46077200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr11:46039400-46096800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr11:46041000-46066200 Weak transcription Liver Liver
6 chr11:46041000-46071000 Weak transcription Placenta Placenta
7 chr11:46041200-46070800 Weak transcription Thymus Thymus
8 chr11:46041400-46086600 Weak transcription Fetal Intestine Large intestine
9 chr11:46042000-46071000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr11:46042000-46071000 Weak transcription Brain Angular Gyrus brain
11 chr11:46043200-46071000 Weak transcription Lung lung
12 chr11:46043200-46086800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr11:46044400-46071000 Weak transcription Fetal Muscle Trunk muscle
14 chr11:46044400-46071200 Weak transcription Fetal Intestine Small intestine
15 chr11:46045000-46070600 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr11:46045000-46087000 Weak transcription Hela-S3 cervix
17 chr11:46048000-46070400 Weak transcription Primary B cells from peripheral blood blood
18 chr11:46048600-46070600 Weak transcription Fetal Muscle Leg muscle
19 chr11:46049200-46071000 Weak transcription Fetal Brain Male brain
20 chr11:46049200-46078800 Weak transcription Aorta Aorta
21 chr11:46049400-46067200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr11:46049400-46068400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr11:46049400-46071000 Weak transcription HSMM muscle
24 chr11:46049600-46069200 Weak transcription HSMMtube muscle
25 chr11:46053200-46071000 Weak transcription Gastric stomach
26 chr11:46055400-46066200 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr11:46055400-46070400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr11:46056400-46067600 Weak transcription Psoas Muscle Psoas
29 chr11:46057400-46071000 Weak transcription NHDF-Ad bronchial
30 chr11:46059200-46071000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr11:46060600-46067600 Weak transcription Left Ventricle heart
32 chr11:46061600-46068600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr11:46061800-46067200 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr11:46061800-46070600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr11:46061800-46070600 Weak transcription Fetal Stomach stomach
36 chr11:46062000-46070600 Weak transcription Colon Smooth Muscle Colon
37 chr11:46062000-46100800 Weak transcription Brain Cingulate Gyrus brain
38 chr11:46062200-46066600 Weak transcription Ovary ovary
39 chr11:46062200-46067800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr11:46062200-46070800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr11:46062200-46071000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr11:46062200-46071000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr11:46062200-46071000 Weak transcription Brain Hippocampus Middle brain
44 chr11:46062200-46071600 Weak transcription Brain Inferior Temporal Lobe brain
45 chr11:46062200-46071800 Weak transcription Small Intestine intestine
46 chr11:46062400-46071200 Weak transcription Osteobl bone
47 chr11:46062600-46065200 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr11:46062600-46067200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr11:46062600-46070200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr11:46062600-46070400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015