The 2.0 version of rSNPBase

Variant report

Variant rs61882508
Chromosome Location chr11:46020138-46020139
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
2 chr11:46001600-46021000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr11:46002000-46025000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr11:46002000-46042400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr11:46002000-46056200 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr11:46002200-46024800 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr11:46002200-46025000 Weak transcription Primary monocytes fromperipheralblood blood
8 chr11:46002600-46023200 Weak transcription Primary B cells from peripheral blood blood
9 chr11:46006200-46025200 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr11:46006800-46021400 Weak transcription Primary B cells from cord blood blood
11 chr11:46012800-46031000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr11:46012800-46062800 Weak transcription GM12878-XiMat blood
13 chr11:46013400-46021200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr11:46015400-46022600 Weak transcription HSMM muscle
15 chr11:46015600-46022800 Weak transcription Brain Inferior Temporal Lobe brain
16 chr11:46015600-46026400 Weak transcription Stomach Mucosa stomach
17 chr11:46016200-46020200 Weak transcription Fetal Muscle Trunk muscle
18 chr11:46016200-46021000 Weak transcription Placenta Amnion Placenta Amnion
19 chr11:46016200-46022600 Weak transcription HSMMtube muscle
20 chr11:46016200-46022800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr11:46016200-46048200 Weak transcription Esophagus oesophagus
22 chr11:46016400-46022800 Weak transcription Brain Substantia Nigra brain
23 chr11:46016400-46022800 Weak transcription Ovary ovary
24 chr11:46016400-46023000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr11:46016400-46025200 Weak transcription Right Atrium heart
26 chr11:46016600-46022800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr11:46016600-46023000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr11:46016800-46022800 Weak transcription Aorta Aorta
29 chr11:46016800-46023000 Weak transcription Stomach Smooth Muscle stomach
30 chr11:46016800-46025200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr11:46016800-46044000 Weak transcription Primary T cells from cord blood blood
32 chr11:46017000-46022600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr11:46017000-46022600 Weak transcription Colon Smooth Muscle Colon
34 chr11:46017000-46022800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr11:46017000-46022800 Weak transcription Fetal Muscle Leg muscle
36 chr11:46017000-46022800 Weak transcription Rectal Smooth Muscle rectum
37 chr11:46017000-46023000 Weak transcription Brain Anterior Caudate brain
38 chr11:46017000-46023200 Weak transcription Brain Angular Gyrus brain
39 chr11:46017000-46032000 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr11:46017200-46021800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr11:46017200-46022600 Weak transcription Brain Hippocampus Middle brain
42 chr11:46017200-46022800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr11:46017400-46022600 Weak transcription Fetal Stomach stomach
44 chr11:46017400-46024800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr11:46018200-46022800 Weak transcription Brain Germinal Matrix brain
46 chr11:46018600-46022800 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr11:46019200-46020200 Genic enhancers K562 blood
48 chr11:46019600-46021400 Weak transcription H1 Cell Line embryonic stem cell
49 chr11:46019600-46021800 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr11:46019600-46022600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015