The 2.0 version of rSNPBase

Variant report

Variant rs61882509
Chromosome Location chr11:46022070-46022071
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
2 chr11:46002000-46025000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr11:46002000-46042400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr11:46002000-46056200 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr11:46002200-46024800 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr11:46002200-46025000 Weak transcription Primary monocytes fromperipheralblood blood
7 chr11:46002600-46023200 Weak transcription Primary B cells from peripheral blood blood
8 chr11:46006200-46025200 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr11:46012800-46031000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr11:46012800-46062800 Weak transcription GM12878-XiMat blood
11 chr11:46015400-46022600 Weak transcription HSMM muscle
12 chr11:46015600-46022800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr11:46015600-46026400 Weak transcription Stomach Mucosa stomach
14 chr11:46016200-46022600 Weak transcription HSMMtube muscle
15 chr11:46016200-46022800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr11:46016200-46048200 Weak transcription Esophagus oesophagus
17 chr11:46016400-46022800 Weak transcription Brain Substantia Nigra brain
18 chr11:46016400-46022800 Weak transcription Ovary ovary
19 chr11:46016400-46023000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr11:46016400-46025200 Weak transcription Right Atrium heart
21 chr11:46016600-46022800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr11:46016600-46023000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr11:46016800-46022800 Weak transcription Aorta Aorta
24 chr11:46016800-46023000 Weak transcription Stomach Smooth Muscle stomach
25 chr11:46016800-46025200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr11:46016800-46044000 Weak transcription Primary T cells from cord blood blood
27 chr11:46017000-46022600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr11:46017000-46022600 Weak transcription Colon Smooth Muscle Colon
29 chr11:46017000-46022800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr11:46017000-46022800 Weak transcription Fetal Muscle Leg muscle
31 chr11:46017000-46022800 Weak transcription Rectal Smooth Muscle rectum
32 chr11:46017000-46023000 Weak transcription Brain Anterior Caudate brain
33 chr11:46017000-46023200 Weak transcription Brain Angular Gyrus brain
34 chr11:46017000-46032000 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr11:46017200-46022600 Weak transcription Brain Hippocampus Middle brain
36 chr11:46017200-46022800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:46017400-46022600 Weak transcription Fetal Stomach stomach
38 chr11:46017400-46024800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr11:46018200-46022800 Weak transcription Brain Germinal Matrix brain
40 chr11:46018600-46022800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr11:46019600-46022600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr11:46019600-46022800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr11:46019600-46023000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr11:46019800-46022800 Weak transcription Fetal Heart heart
45 chr11:46019800-46025000 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr11:46019800-46025200 Weak transcription H9 Cell Line embryonic stem cell
47 chr11:46020000-46022800 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr11:46020000-46022800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr11:46020000-46023000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr11:46020600-46024800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015