The 2.0 version of rSNPBase

Variant report

Variant rs61882514
Chromosome Location chr11:46035020-46035021
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
2 chr11:46002000-46042400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr11:46002000-46056200 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr11:46012800-46062800 Weak transcription GM12878-XiMat blood
5 chr11:46016200-46048200 Weak transcription Esophagus oesophagus
6 chr11:46016800-46044000 Weak transcription Primary T cells from cord blood blood
7 chr11:46022000-46074600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr11:46023400-46038200 Weak transcription A549 lung
9 chr11:46023400-46041800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr11:46023400-46047800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr11:46023400-46048200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr11:46023600-46041600 Weak transcription Ovary ovary
13 chr11:46023600-46046400 Weak transcription Stomach Smooth Muscle stomach
14 chr11:46024800-46042600 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr11:46025600-46041800 Weak transcription Primary monocytes fromperipheralblood blood
16 chr11:46025600-46047400 Weak transcription HSMMtube muscle
17 chr11:46025600-46056200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr11:46026200-46055600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr11:46026400-46047800 Weak transcription HSMM muscle
20 chr11:46030000-46041800 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr11:46031400-46048400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr11:46032200-46037400 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr11:46032200-46042400 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr11:46032400-46035200 Enhancers Cortex derived primary cultured neurospheres brain
25 chr11:46032400-46048400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr11:46032600-46042800 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr11:46032600-46052800 Weak transcription Fetal Lung lung
28 chr11:46033400-46035200 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr11:46033400-46035200 Enhancers iPS-18 Cell Line embryonic stem cell
30 chr11:46033400-46035400 Enhancers HUES48 Cell Line embryonic stem cell
31 chr11:46033600-46035200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
32 chr11:46033600-46035400 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr11:46033600-46035800 Enhancers H9 Cell Line embryonic stem cell
34 chr11:46033600-46044600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr11:46034000-46035200 Enhancers H1 Cell Line embryonic stem cell
36 chr11:46034200-46038800 Weak transcription K562 blood
37 chr11:46034200-46041600 Weak transcription Brain Hippocampus Middle brain
38 chr11:46034200-46049000 Weak transcription Fetal Kidney kidney
39 chr11:46034400-46035400 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr11:46034400-46048200 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr11:46034400-46056000 Weak transcription Primary B cells from cord blood blood
42 chr11:46034600-46042600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr11:46034800-46035400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr11:46034800-46061800 Weak transcription Primary T cells fromperipheralblood blood
45 chr11:46035000-46035200 Enhancers Primary T helper cells PMA-I stimulated --
46 chr11:46035000-46035200 Enhancers Primary T helper 17 cells PMA-I stimulated --
47 chr11:46035000-46041000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr11:46035000-46043000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015