The 2.0 version of rSNPBase

Variant report

Variant rs1038733
Chromosome Location chr11:46097418-46097419
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46062000-46100800 Weak transcription Brain Cingulate Gyrus brain
2 chr11:46063200-46119800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr11:46063600-46098000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr11:46063600-46104600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr11:46064000-46097600 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr11:46071200-46097800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr11:46071400-46097800 Weak transcription Fetal Muscle Trunk muscle
8 chr11:46071400-46114800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr11:46071400-46118800 Weak transcription Lung lung
10 chr11:46072000-46097600 Weak transcription Brain Hippocampus Middle brain
11 chr11:46072000-46100800 Weak transcription Thymus Thymus
12 chr11:46072000-46101000 Weak transcription Brain Anterior Caudate brain
13 chr11:46072000-46119400 Weak transcription Brain Angular Gyrus brain
14 chr11:46072600-46097600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr11:46072600-46100800 Weak transcription Placenta Placenta
16 chr11:46073200-46101000 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr11:46073200-46101800 Weak transcription Fetal Stomach stomach
18 chr11:46073800-46122200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr11:46074200-46101200 Weak transcription Brain Substantia Nigra brain
20 chr11:46077600-46109400 Weak transcription HepG2 liver
21 chr11:46079000-46128200 Weak transcription Aorta Aorta
22 chr11:46079600-46102200 Weak transcription H9 Cell Line embryonic stem cell
23 chr11:46080400-46120800 Weak transcription Stomach Smooth Muscle stomach
24 chr11:46080600-46103000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr11:46082000-46114000 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr11:46083600-46107600 Strong transcription Primary monocytes fromperipheralblood blood
27 chr11:46084800-46104800 Weak transcription Fetal Brain Male brain
28 chr11:46084800-46118600 Weak transcription Pancreas Pancrea
29 chr11:46085000-46119600 Weak transcription Brain Germinal Matrix brain
30 chr11:46085400-46106000 Strong transcription Primary neutrophils fromperipheralblood blood
31 chr11:46085800-46111000 Weak transcription Placenta Amnion Placenta Amnion
32 chr11:46086600-46112200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr11:46086800-46099400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr11:46087000-46099400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr11:46087200-46120800 Weak transcription H1 Cell Line embryonic stem cell
36 chr11:46087400-46097600 Weak transcription Fetal Brain Female brain
37 chr11:46087400-46103800 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr11:46087400-46104000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr11:46087600-46120400 Weak transcription HSMMtube muscle
40 chr11:46087600-46121000 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr11:46087800-46097600 Weak transcription Liver Liver
42 chr11:46087800-46098200 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr11:46089200-46099600 Strong transcription Primary hematopoietic stem cells blood
44 chr11:46089600-46120400 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr11:46089800-46097600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr11:46089800-46109600 Weak transcription Fetal Kidney kidney
47 chr11:46089800-46111400 Weak transcription Hela-S3 cervix
48 chr11:46091200-46097800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr11:46091600-46101000 Weak transcription Duodenum Mucosa Duodenum
50 chr11:46091600-46101600 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015