Variant report

Variant	rs930067
Chromosome Location	chr5:35127524-35127525
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10059483	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs10067752	0.87[EUR][1000 genomes]
rs10434586	1.00[CEU][hapmap]
rs1115964	1.00[ASN][1000 genomes]
rs13164310	0.92[EUR][1000 genomes]
rs1587605	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs1609785	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs2914107	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs2914108	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs2914109	1.00[CEU][hapmap]
rs2962084	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs2962086	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs2962088	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs2962089	1.00[CEU][hapmap]
rs2962097	1.00[CEU][hapmap]
rs2962112	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs2962113	1.00[CEU][hapmap]
rs34349127	1.00[ASN][1000 genomes]
rs34531945	1.00[ASN][1000 genomes]
rs35322400	0.89[EUR][1000 genomes]
rs4288098	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs4419570	0.92[EUR][1000 genomes]
rs4585417	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs4703501	0.89[EUR][1000 genomes]
rs55687280	1.00[ASN][1000 genomes]
rs59549906	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60000687	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6451181	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs66519917	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66782186	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66891287	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66893440	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66967212	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72732874	1.00[ASN][1000 genomes]
rs72734538	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075084	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075086	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075098	0.92[EUR][1000 genomes]
rs9292571	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs9292572	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs930068	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35112800-35129800	Weak transcription	Duodenum Mucosa	Duodenum
2	chr5:35115800-35129800	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr5:35116800-35127800	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr5:35118000-35127600	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr5:35118200-35129800	Weak transcription	Placenta	Placenta
6	chr5:35120200-35127800	Weak transcription	NHDF-Ad	bronchial
7	chr5:35120200-35127800	Weak transcription	NHLF	lung
8	chr5:35120400-35129000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr5:35121600-35129800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr5:35125400-35129000	Weak transcription	Stomach Mucosa	stomach
11	chr5:35126200-35129800	Weak transcription	Ovary	ovary
12	chr5:35126400-35129800	Weak transcription	Fetal Intestine Small	intestine
13	chr5:35126800-35129000	Weak transcription	HepG2	liver
14	chr5:35126800-35129800	Weak transcription	Fetal Intestine Large	intestine
15	chr5:35127200-35128200	Enhancers	Fetal Heart	heart
16	chr5:35127200-35132200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr5:35127400-35127800	Weak transcription	Pancreas	Pancrea
18	chr5:35127400-35129000	Weak transcription	Liver	Liver

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