Variant report

Variant	rs9351732
Chromosome Location	chr6:69324546-69324547
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:69287462..69289135-chr6:69323588..69325496,2	K562	blood:

Extended variants
information (count: 63 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10945140	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs1357618	0.89[JPT][hapmap]
rs1403927	0.89[JPT][hapmap]
rs1523937	0.89[JPT][hapmap]
rs1523947	0.89[JPT][hapmap]
rs1523948	0.89[JPT][hapmap]
rs1983623	0.81[JPT][hapmap]
rs2024562	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs2064389	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs2140510	0.90[JPT][hapmap]
rs2177448	0.89[JPT][hapmap]
rs2204285	0.89[JPT][hapmap]
rs2206834	0.90[JPT][hapmap]
rs2206836	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs2223724	0.89[JPT][hapmap]
rs2585601	0.82[JPT][hapmap]
rs2585603	0.82[JPT][hapmap]
rs2746128	0.81[JPT][hapmap]
rs2746133	0.82[JPT][hapmap]
rs2880145	0.82[CEU][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes]
rs4708197	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4708231	0.82[CEU][hapmap];0.90[JPT][hapmap];0.86[YRI][hapmap];0.89[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs4708243	0.82[CEU][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap]
rs562010	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs6455295	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs6455296	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs6455298	0.90[JPT][hapmap]
rs6455302	0.89[JPT][hapmap]
rs6455303	0.89[JPT][hapmap]
rs6911395	0.89[JPT][hapmap]
rs6920537	0.89[JPT][hapmap]
rs6928142	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs6929378	0.89[JPT][hapmap]
rs6932940	0.87[JPT][hapmap]
rs7738291	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs7746943	0.89[JPT][hapmap];0.81[EUR][1000 genomes]
rs7747314	1.00[JPT][hapmap]
rs7752462	0.90[AFR][1000 genomes]
rs7754795	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs7755356	0.90[JPT][hapmap]
rs7768160	0.81[EUR][1000 genomes]
rs7769724	0.90[JPT][hapmap]
rs9294806	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs9294807	0.90[JPT][hapmap]
rs9294810	0.90[JPT][hapmap]
rs9294811	0.90[JPT][hapmap]
rs9346239	0.89[JPT][hapmap]
rs9346240	0.89[JPT][hapmap]
rs9346243	0.90[JPT][hapmap]
rs9346245	0.90[JPT][hapmap]
rs9346246	0.89[JPT][hapmap]
rs9360357	1.00[JPT][hapmap];0.81[EUR][1000 genomes]
rs9360361	0.89[JPT][hapmap]
rs9363963	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs9446057	0.89[JPT][hapmap]
rs9446058	0.89[JPT][hapmap]
rs9454616	0.89[JPT][hapmap]
rs9454621	0.89[JPT][hapmap]
rs9454622	0.90[JPT][hapmap]
rs992784	0.90[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886130	chr6:68950298-69531957	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv830680	chr6:69192214-69351103	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv970727	chr6:69319985-69327051	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69323200-69326000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr6:69324200-69324600	Enhancers	Monocytes-CD14+_RO01746	blood

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