The 2.0 version of rSNPBase

Variant report

Variant rs9368553
Chromosome Location chr6:28082265-28082266
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28073000-28083800 Weak transcription Aorta Aorta
2 chr6:28073200-28082400 Weak transcription Fetal Stomach stomach
3 chr6:28073200-28083000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr6:28073200-28083400 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr6:28073200-28091400 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr6:28073200-28091800 Weak transcription Right Ventricle heart
7 chr6:28073400-28082400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr6:28073400-28082400 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr6:28073400-28082400 Weak transcription Fetal Muscle Leg muscle
10 chr6:28073400-28082400 Weak transcription Stomach Smooth Muscle stomach
11 chr6:28073400-28082600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr6:28073400-28082600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr6:28073400-28082600 Weak transcription Placenta Placenta
14 chr6:28073400-28082800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr6:28073400-28082800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr6:28073400-28083000 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr6:28073400-28083000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr6:28073400-28083000 Weak transcription Fetal Lung lung
19 chr6:28073400-28083000 Weak transcription Thymus Thymus
20 chr6:28073400-28083000 Weak transcription Spleen Spleen
21 chr6:28073400-28083200 Weak transcription Brain Angular Gyrus brain
22 chr6:28073400-28083400 Weak transcription A549 lung
23 chr6:28073400-28083600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:28073400-28083600 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr6:28073400-28083600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr6:28073400-28083600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr6:28073400-28083600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr6:28073400-28083600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr6:28073400-28083600 Weak transcription Fetal Kidney kidney
30 chr6:28073400-28083800 Weak transcription Placenta Amnion Placenta Amnion
31 chr6:28073400-28083800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr6:28073400-28088000 Weak transcription NHLF lung
33 chr6:28073400-28091200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr6:28073400-28091400 Weak transcription NHDF-Ad bronchial
35 chr6:28073400-28091800 Weak transcription H9 Cell Line embryonic stem cell
36 chr6:28073400-28091800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr6:28073400-28091800 Weak transcription Rectal Smooth Muscle rectum
38 chr6:28073400-28092000 Weak transcription Small Intestine intestine
39 chr6:28073400-28092200 Weak transcription Esophagus oesophagus
40 chr6:28073400-28092200 Weak transcription Gastric stomach
41 chr6:28073400-28092200 Weak transcription Pancreas Pancrea
42 chr6:28073600-28082400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:28073600-28082400 Weak transcription Muscle Satellite Cultured Cells --
44 chr6:28073600-28082600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr6:28073600-28082600 Weak transcription K562 blood
46 chr6:28073600-28083000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr6:28073600-28083000 Weak transcription Brain Germinal Matrix brain
48 chr6:28073600-28083400 Weak transcription Primary B cells from peripheral blood blood
49 chr6:28073600-28083400 Weak transcription Colon Smooth Muscle Colon
50 chr6:28073600-28083600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015