The 2.0 version of rSNPBase

Variant report

Variant rs9368554
Chromosome Location chr6:28082711-28082712
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28073000-28083800 Weak transcription Aorta Aorta
2 chr6:28073200-28083000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr6:28073200-28083400 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr6:28073200-28091400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr6:28073200-28091800 Weak transcription Right Ventricle heart
6 chr6:28073400-28082800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr6:28073400-28082800 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr6:28073400-28083000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr6:28073400-28083000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr6:28073400-28083000 Weak transcription Fetal Lung lung
11 chr6:28073400-28083000 Weak transcription Thymus Thymus
12 chr6:28073400-28083000 Weak transcription Spleen Spleen
13 chr6:28073400-28083200 Weak transcription Brain Angular Gyrus brain
14 chr6:28073400-28083400 Weak transcription A549 lung
15 chr6:28073400-28083600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr6:28073400-28083600 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr6:28073400-28083600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr6:28073400-28083600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr6:28073400-28083600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr6:28073400-28083600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:28073400-28083600 Weak transcription Fetal Kidney kidney
22 chr6:28073400-28083800 Weak transcription Placenta Amnion Placenta Amnion
23 chr6:28073400-28083800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr6:28073400-28088000 Weak transcription NHLF lung
25 chr6:28073400-28091200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr6:28073400-28091400 Weak transcription NHDF-Ad bronchial
27 chr6:28073400-28091800 Weak transcription H9 Cell Line embryonic stem cell
28 chr6:28073400-28091800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr6:28073400-28091800 Weak transcription Rectal Smooth Muscle rectum
30 chr6:28073400-28092000 Weak transcription Small Intestine intestine
31 chr6:28073400-28092200 Weak transcription Esophagus oesophagus
32 chr6:28073400-28092200 Weak transcription Gastric stomach
33 chr6:28073400-28092200 Weak transcription Pancreas Pancrea
34 chr6:28073600-28083000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr6:28073600-28083000 Weak transcription Brain Germinal Matrix brain
36 chr6:28073600-28083400 Weak transcription Primary B cells from peripheral blood blood
37 chr6:28073600-28083400 Weak transcription Colon Smooth Muscle Colon
38 chr6:28073600-28083600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr6:28073600-28083600 Weak transcription HepG2 liver
40 chr6:28073600-28091600 Weak transcription Hela-S3 cervix
41 chr6:28073600-28091600 Weak transcription NHEK skin
42 chr6:28074000-28083400 Weak transcription Psoas Muscle Psoas
43 chr6:28075600-28083600 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr6:28075800-28083600 Weak transcription Ovary ovary
45 chr6:28075800-28084000 Weak transcription Lung lung
46 chr6:28076400-28086000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr6:28076600-28083800 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr6:28076800-28083200 Weak transcription Brain Substantia Nigra brain
49 chr6:28077000-28083600 Weak transcription Brain Cingulate Gyrus brain
50 chr6:28077000-28083800 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015