Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1481432	1.00[CHB][hapmap]
rs17075218	0.81[ASN][1000 genomes]
rs17075221	0.81[ASN][1000 genomes]
rs2179113	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2493882	1.00[CHB][hapmap]
rs2493884	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs2493891	1.00[CHB][hapmap]
rs547797	1.00[CHB][hapmap]
rs56303196	0.81[ASN][1000 genomes]
rs59950054	0.81[ASN][1000 genomes]
rs6910647	1.00[ASN][1000 genomes]
rs6913809	1.00[CHB][hapmap]
rs73543899	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547807	0.81[ASN][1000 genomes]
rs73547876	0.81[ASN][1000 genomes]
rs73547891	0.81[ASN][1000 genomes]
rs73765222	0.81[ASN][1000 genomes]
rs73765232	0.81[ASN][1000 genomes]
rs7745709	0.81[ASN][1000 genomes]
rs7753356	0.81[ASN][1000 genomes]
rs7753869	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs7754686	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs7758523	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs7762969	1.00[CHB][hapmap]
rs9320461	1.00[ASN][1000 genomes]
rs9481351	1.00[CEU][hapmap]
rs9481370	0.94[ASN][1000 genomes]
rs9488175	1.00[CEU][hapmap]
rs9488180	1.00[CEU][hapmap]
rs9488182	1.00[CEU][hapmap]
rs9488203	0.94[ASN][1000 genomes]
rs9488204	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv1034256	chr6:113703567-113793790	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1021815	chr6:113703567-113799956	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv518991	chr6:113760526-113799618	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113772400-113785800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr6:113777200-113785600	Weak transcription	A549	lung
3	chr6:113780000-113785400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr6:113780000-113785400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr6:113780000-113785400	Weak transcription	NHLF	lung
6	chr6:113780200-113785000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr6:113780200-113785400	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr6:113780400-113785400	Weak transcription	HUVEC	blood vessel
9	chr6:113780400-113785600	Weak transcription	NH-A	brain
10	chr6:113780400-113785800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr6:113780600-113785800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr6:113782000-113783400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr6:113782600-113783400	Enhancers	Fetal Lung	lung
14	chr6:113782800-113785400	Weak transcription	Osteobl	bone
15	chr6:113783200-113785400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr6:113783200-113785400	Weak transcription	NHDF-Ad	bronchial
17	chr6:113783200-113785400	Weak transcription	NHEK	skin
18	chr6:113783200-113785800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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