Variant report

Variant	rs73765232
Chromosome Location	chr6:113822822-113822823
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:113817087..113819797-chr6:113821858..113823448,2	MCF-7	breast:
2	chr6:113821726..113823310-chr6:114178128..114180011,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000155130	Chromatin interaction

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs1481432	0.88[ASN][1000 genomes]
rs1585973	0.88[ASN][1000 genomes]
rs1600767	0.88[ASN][1000 genomes]
rs17075218	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17075221	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1904994	0.88[ASN][1000 genomes]
rs1982686	0.88[ASN][1000 genomes]
rs2179113	0.81[ASN][1000 genomes]
rs2493884	1.00[ASN][1000 genomes]
rs2493891	0.88[ASN][1000 genomes]
rs3963300	0.88[ASN][1000 genomes]
rs531979	0.88[ASN][1000 genomes]
rs547797	0.88[ASN][1000 genomes]
rs549875	0.88[ASN][1000 genomes]
rs56303196	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58875635	0.88[ASN][1000 genomes]
rs59950054	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61320559	0.88[ASN][1000 genomes]
rs61734440	0.82[ASN][1000 genomes]
rs6910647	0.81[ASN][1000 genomes]
rs6913809	0.88[ASN][1000 genomes]
rs6935853	0.88[ASN][1000 genomes]
rs6942149	0.88[ASN][1000 genomes]
rs73531703	0.88[ASN][1000 genomes]
rs73531704	0.88[ASN][1000 genomes]
rs73531705	0.88[ASN][1000 genomes]
rs73531708	0.88[ASN][1000 genomes]
rs73531717	0.88[ASN][1000 genomes]
rs73543899	0.81[ASN][1000 genomes]
rs73547807	1.00[ASN][1000 genomes]
rs73547876	1.00[ASN][1000 genomes]
rs73547891	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73549618	0.88[ASN][1000 genomes]
rs73549630	0.88[ASN][1000 genomes]
rs73549634	0.88[ASN][1000 genomes]
rs73549650	0.88[ASN][1000 genomes]
rs73549655	0.88[ASN][1000 genomes]
rs73765222	1.00[ASN][1000 genomes]
rs73765248	0.88[ASN][1000 genomes]
rs7745709	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7753356	1.00[ASN][1000 genomes]
rs7753869	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7754686	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7758523	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7759659	0.88[ASN][1000 genomes]
rs7762969	0.88[ASN][1000 genomes]
rs9320461	0.81[ASN][1000 genomes]
rs9481370	0.88[ASN][1000 genomes]
rs9488197	0.81[ASN][1000 genomes]
rs9488203	0.88[ASN][1000 genomes]
rs9488204	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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