Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs12428589	1.00[EUR][1000 genomes]
rs12429124	0.86[JPT][hapmap];1.00[EUR][1000 genomes]
rs12430678	1.00[EUR][1000 genomes]
rs1933194	1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1999857	1.00[JPT][hapmap]
rs35226443	1.00[EUR][1000 genomes]
rs7321917	1.00[JPT][hapmap]
rs7334046	1.00[JPT][hapmap]
rs7338330	1.00[JPT][hapmap]
rs7338542	1.00[JPT][hapmap]
rs7491566	1.00[JPT][hapmap]
rs7987140	1.00[JPT][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7992127	1.00[JPT][hapmap]
rs9301832	1.00[JPT][hapmap]
rs9556205	0.88[JPT][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9556206	0.88[JPT][hapmap]
rs9556211	0.86[JPT][hapmap]
rs9556216	1.00[EUR][1000 genomes]
rs9556217	1.00[EUR][1000 genomes]
rs9556224	1.00[EUR][1000 genomes]
rs9556234	1.00[EUR][1000 genomes]
rs9561124	0.89[JPT][hapmap]
rs9561127	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9561128	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9561130	1.00[JPT][hapmap]
rs9561131	0.88[JPT][hapmap]
rs9561142	0.86[JPT][hapmap]
rs9561143	0.86[JPT][hapmap];1.00[EUR][1000 genomes]
rs9561164	1.00[EUR][1000 genomes]
rs9561169	1.00[EUR][1000 genomes]
rs9561175	1.00[EUR][1000 genomes]
rs9561176	1.00[EUR][1000 genomes]
rs9561177	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456071	chr13:93279563-93377562	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv562745	chr13:93279563-93377562	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv869070	chr13:93347616-94286933	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be: