The 2.0 version of rSNPBase

Variant report

Variant rs1011309
Chromosome Location chr2:32179532-32179533
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32099600-32193000 Weak transcription Hela-S3 cervix
2 chr2:32116800-32182200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr2:32117000-32205200 Weak transcription NH-A brain
4 chr2:32119200-32181400 Weak transcription Stomach Smooth Muscle stomach
5 chr2:32127400-32190200 Weak transcription Lung lung
6 chr2:32132400-32183000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:32136600-32188800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr2:32137000-32189200 Weak transcription Fetal Kidney kidney
9 chr2:32145000-32183000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:32145200-32190800 Weak transcription Pancreas Pancrea
11 chr2:32146400-32183400 Weak transcription Psoas Muscle Psoas
12 chr2:32166800-32182400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr2:32167200-32183000 Weak transcription Colon Smooth Muscle Colon
14 chr2:32167200-32193200 Weak transcription HSMM muscle
15 chr2:32168000-32180600 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr2:32168200-32183000 Weak transcription Primary T cells fromperipheralblood blood
17 chr2:32168200-32185000 Weak transcription Duodenum Mucosa Duodenum
18 chr2:32168200-32189600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr2:32168200-32194400 Weak transcription Fetal Muscle Trunk muscle
20 chr2:32168200-32197400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr2:32168400-32180800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr2:32168400-32186200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr2:32168400-32186400 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr2:32168400-32189400 Weak transcription Fetal Intestine Small intestine
25 chr2:32168400-32193600 Weak transcription Fetal Brain Female brain
26 chr2:32168400-32194200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr2:32168400-32202000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr2:32168400-32205200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr2:32168400-32205800 Weak transcription Fetal Lung lung
30 chr2:32168400-32205800 Weak transcription Thymus Thymus
31 chr2:32168400-32212200 Weak transcription Esophagus oesophagus
32 chr2:32168400-32233400 Weak transcription Fetal Stomach stomach
33 chr2:32168600-32180800 Weak transcription Primary hematopoietic stem cells blood
34 chr2:32168600-32181200 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr2:32168600-32181400 Weak transcription Primary B cells from peripheral blood blood
36 chr2:32168600-32187000 Weak transcription Fetal Intestine Large intestine
37 chr2:32168600-32187200 Weak transcription Fetal Thymus thymus
38 chr2:32168600-32193400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr2:32168800-32182400 Weak transcription Adipose Nuclei Adipose
40 chr2:32168800-32182800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr2:32168800-32190000 Weak transcription Dnd41 blood
42 chr2:32168800-32193200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr2:32169000-32181200 Weak transcription Primary B cells from cord blood blood
44 chr2:32169000-32182400 Weak transcription HMEC breast
45 chr2:32169400-32180600 Weak transcription Primary monocytes fromperipheralblood blood
46 chr2:32169600-32183000 Weak transcription Small Intestine intestine
47 chr2:32170800-32183000 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr2:32170800-32185000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr2:32171000-32179600 Weak transcription GM12878-XiMat blood
50 chr2:32171000-32182400 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015