The 2.0 version of rSNPBase

Variant report

Variant rs6543644
Chromosome Location chr2:32118556-32118557
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32061600-32172800 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr2:32064600-32142400 Weak transcription NHDF-Ad bronchial
3 chr2:32065400-32123000 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr2:32068000-32121400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr2:32068400-32121400 Weak transcription Fetal Brain Female brain
6 chr2:32074600-32127000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:32075800-32170000 Weak transcription Aorta Aorta
8 chr2:32086200-32127000 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr2:32086600-32174400 Weak transcription NHLF lung
10 chr2:32088000-32157600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr2:32088200-32127600 Weak transcription K562 blood
12 chr2:32089400-32160000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr2:32093000-32122200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr2:32099600-32193000 Weak transcription Hela-S3 cervix
15 chr2:32100800-32147800 Weak transcription Spleen Spleen
16 chr2:32101200-32123600 Weak transcription HUVEC blood vessel
17 chr2:32101600-32127000 Weak transcription Brain Hippocampus Middle brain
18 chr2:32103200-32133600 Weak transcription Brain Germinal Matrix brain
19 chr2:32103600-32125800 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr2:32104600-32123600 Weak transcription Fetal Kidney kidney
21 chr2:32104600-32131600 Weak transcription Fetal Heart heart
22 chr2:32105000-32127000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr2:32105400-32146600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:32107200-32123600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:32107200-32123600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr2:32107200-32126600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr2:32107200-32126600 Weak transcription Lung lung
28 chr2:32107200-32127000 Weak transcription Ovary ovary
29 chr2:32107200-32167600 Weak transcription Left Ventricle heart
30 chr2:32107400-32119600 Weak transcription Fetal Muscle Trunk muscle
31 chr2:32107400-32122400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr2:32107400-32123600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr2:32107400-32123600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:32107400-32125400 Weak transcription Thymus Thymus
35 chr2:32107400-32126200 Weak transcription Fetal Intestine Small intestine
36 chr2:32107400-32126600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr2:32107400-32126600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr2:32107400-32131800 Weak transcription Colon Smooth Muscle Colon
39 chr2:32108800-32119600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr2:32109600-32123600 Weak transcription A549 lung
41 chr2:32112200-32125400 Weak transcription Primary T cells from cord blood blood
42 chr2:32112400-32129200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr2:32114000-32120400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr2:32114200-32122200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr2:32114200-32125400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr2:32114400-32153800 Weak transcription Brain Cingulate Gyrus brain
47 chr2:32114800-32118600 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr2:32115000-32126600 Weak transcription Right Ventricle heart
49 chr2:32115200-32119600 Strong transcription Fetal Thymus thymus
50 chr2:32115400-32126600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015