The 2.0 version of rSNPBase

Variant report

Variant rs34077616
Chromosome Location chr2:32189244-32189245
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32099600-32193000 Weak transcription Hela-S3 cervix
2 chr2:32117000-32205200 Weak transcription NH-A brain
3 chr2:32127400-32190200 Weak transcription Lung lung
4 chr2:32145200-32190800 Weak transcription Pancreas Pancrea
5 chr2:32167200-32193200 Weak transcription HSMM muscle
6 chr2:32168200-32189600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:32168200-32194400 Weak transcription Fetal Muscle Trunk muscle
8 chr2:32168200-32197400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:32168400-32189400 Weak transcription Fetal Intestine Small intestine
10 chr2:32168400-32193600 Weak transcription Fetal Brain Female brain
11 chr2:32168400-32194200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:32168400-32202000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr2:32168400-32205200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:32168400-32205800 Weak transcription Fetal Lung lung
15 chr2:32168400-32205800 Weak transcription Thymus Thymus
16 chr2:32168400-32212200 Weak transcription Esophagus oesophagus
17 chr2:32168400-32233400 Weak transcription Fetal Stomach stomach
18 chr2:32168600-32193400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:32168800-32190000 Weak transcription Dnd41 blood
20 chr2:32168800-32193200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr2:32171000-32227600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:32171200-32198800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:32171400-32192600 Weak transcription Osteobl bone
24 chr2:32183200-32195200 Weak transcription Colon Smooth Muscle Colon
25 chr2:32183600-32205400 Weak transcription Primary monocytes fromperipheralblood blood
26 chr2:32183600-32205400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:32183800-32191800 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr2:32184200-32198000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr2:32184400-32190200 Weak transcription Gastric stomach
30 chr2:32184400-32192800 Weak transcription Brain Germinal Matrix brain
31 chr2:32184800-32205200 Weak transcription Small Intestine intestine
32 chr2:32185000-32191400 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr2:32185200-32209600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr2:32186000-32192600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr2:32186400-32205200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:32186600-32196800 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr2:32186600-32199200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr2:32186600-32212200 Weak transcription HMEC breast
39 chr2:32186800-32205200 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:32186800-32208000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr2:32187000-32193000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:32187000-32211400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr2:32187200-32189400 Strong transcription Primary B cells from cord blood blood
44 chr2:32187200-32198800 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr2:32187200-32212000 Weak transcription Ovary ovary
46 chr2:32187400-32190200 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr2:32187400-32192600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr2:32187400-32205200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr2:32187400-32210600 Weak transcription Aorta Aorta
50 chr2:32187600-32190000 Strong transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015