The 2.0 version of rSNPBase

Variant report

Variant rs67493880
Chromosome Location chr2:32188138-32188139
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32099600-32193000 Weak transcription Hela-S3 cervix
2 chr2:32117000-32205200 Weak transcription NH-A brain
3 chr2:32127400-32190200 Weak transcription Lung lung
4 chr2:32136600-32188800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr2:32137000-32189200 Weak transcription Fetal Kidney kidney
6 chr2:32145200-32190800 Weak transcription Pancreas Pancrea
7 chr2:32167200-32193200 Weak transcription HSMM muscle
8 chr2:32168200-32189600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr2:32168200-32194400 Weak transcription Fetal Muscle Trunk muscle
10 chr2:32168200-32197400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr2:32168400-32189400 Weak transcription Fetal Intestine Small intestine
12 chr2:32168400-32193600 Weak transcription Fetal Brain Female brain
13 chr2:32168400-32194200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:32168400-32202000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr2:32168400-32205200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:32168400-32205800 Weak transcription Fetal Lung lung
17 chr2:32168400-32205800 Weak transcription Thymus Thymus
18 chr2:32168400-32212200 Weak transcription Esophagus oesophagus
19 chr2:32168400-32233400 Weak transcription Fetal Stomach stomach
20 chr2:32168600-32193400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:32168800-32190000 Weak transcription Dnd41 blood
22 chr2:32168800-32193200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr2:32171000-32227600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr2:32171200-32198800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:32171400-32192600 Weak transcription Osteobl bone
26 chr2:32182800-32188200 Enhancers Primary T helper naive cells fromperipheralblood blood
27 chr2:32183200-32195200 Weak transcription Colon Smooth Muscle Colon
28 chr2:32183400-32188200 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr2:32183600-32205400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr2:32183600-32205400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:32183800-32188800 Weak transcription Liver Liver
32 chr2:32183800-32191800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr2:32184200-32188400 Enhancers K562 blood
34 chr2:32184200-32198000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr2:32184400-32190200 Weak transcription Gastric stomach
36 chr2:32184400-32192800 Weak transcription Brain Germinal Matrix brain
37 chr2:32184800-32205200 Weak transcription Small Intestine intestine
38 chr2:32185000-32189000 Enhancers GM12878-XiMat blood
39 chr2:32185000-32191400 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr2:32185200-32209600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr2:32185800-32188600 Enhancers Primary T helper cells PMA-I stimulated --
42 chr2:32186000-32188400 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr2:32186000-32192600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:32186200-32188600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
45 chr2:32186200-32188600 Enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr2:32186400-32188800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr2:32186400-32205200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr2:32186600-32196800 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr2:32186600-32199200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr2:32186600-32212200 Weak transcription HMEC breast

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Last update: Aug 31, 2015