The 2.0 version of rSNPBase

Variant report

Variant rs7559329
Chromosome Location chr2:32183611-32183612
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32099600-32193000 Weak transcription Hela-S3 cervix
2 chr2:32117000-32205200 Weak transcription NH-A brain
3 chr2:32127400-32190200 Weak transcription Lung lung
4 chr2:32136600-32188800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr2:32137000-32189200 Weak transcription Fetal Kidney kidney
6 chr2:32145200-32190800 Weak transcription Pancreas Pancrea
7 chr2:32167200-32193200 Weak transcription HSMM muscle
8 chr2:32168200-32185000 Weak transcription Duodenum Mucosa Duodenum
9 chr2:32168200-32189600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:32168200-32194400 Weak transcription Fetal Muscle Trunk muscle
11 chr2:32168200-32197400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr2:32168400-32186200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr2:32168400-32186400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr2:32168400-32189400 Weak transcription Fetal Intestine Small intestine
15 chr2:32168400-32193600 Weak transcription Fetal Brain Female brain
16 chr2:32168400-32194200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:32168400-32202000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr2:32168400-32205200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr2:32168400-32205800 Weak transcription Fetal Lung lung
20 chr2:32168400-32205800 Weak transcription Thymus Thymus
21 chr2:32168400-32212200 Weak transcription Esophagus oesophagus
22 chr2:32168400-32233400 Weak transcription Fetal Stomach stomach
23 chr2:32168600-32187000 Weak transcription Fetal Intestine Large intestine
24 chr2:32168600-32187200 Weak transcription Fetal Thymus thymus
25 chr2:32168600-32193400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr2:32168800-32190000 Weak transcription Dnd41 blood
27 chr2:32168800-32193200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr2:32170800-32185000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr2:32171000-32227600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr2:32171200-32198800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr2:32171400-32192600 Weak transcription Osteobl bone
32 chr2:32172200-32186000 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr2:32173000-32184200 Weak transcription K562 blood
34 chr2:32173200-32187800 Weak transcription Placenta Amnion Placenta Amnion
35 chr2:32181200-32185200 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr2:32181600-32185400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr2:32182200-32185400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr2:32182400-32184000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:32182400-32184000 Enhancers HMEC breast
40 chr2:32182400-32184400 Flanking Active TSS GM12878-XiMat blood
41 chr2:32182400-32184600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:32182400-32185200 Enhancers Primary T helper 17 cells PMA-I stimulated --
43 chr2:32182400-32185400 Enhancers Primary T helper cells PMA-I stimulated --
44 chr2:32182600-32184200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr2:32182600-32184400 Enhancers NHEK skin
46 chr2:32182600-32184600 Enhancers Primary B cells from peripheral blood blood
47 chr2:32182600-32187600 Weak transcription Primary hematopoietic stem cells blood
48 chr2:32182600-32187800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr2:32182800-32183800 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr2:32182800-32183800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015