Variant report

Variant	rs10149893
Chromosome Location	chr14:69113475-69113476
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69113345..69115393-chr14:69129632..69132510,2	K562	blood:
2	chr14:69112688..69114597-chr14:69122344..69125074,2	K562	blood:
3	chr14:69113122..69115915-chr14:69116555..69118938,2	K562	blood:

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10143428	1.00[CHB][hapmap]
rs10151145	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11623966	0.83[CEU][hapmap];1.00[CHB][hapmap]
rs11627234	0.87[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes]
rs11628293	1.00[CHB][hapmap]
rs11629144	1.00[CHB][hapmap]
rs17106069	0.95[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17829281	1.00[CHB][hapmap]
rs17834977	1.00[CHB][hapmap]
rs4420467	1.00[CHB][hapmap]
rs4516148	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61095830	0.83[EUR][1000 genomes]
rs7140546	1.00[CHB][hapmap]
rs7143663	1.00[CHB][hapmap]
rs739874	1.00[CHB][hapmap]
rs8009398	0.95[CEU][hapmap];1.00[CHB][hapmap];0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8009601	1.00[CHB][hapmap]
rs999737	1.00[CHB][hapmap]

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69105000-69121600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:69106000-69117000	Weak transcription	Fetal Intestine Large	intestine
3	chr14:69106200-69115600	Weak transcription	Esophagus	oesophagus
4	chr14:69106400-69118200	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr14:69106400-69118400	Weak transcription	Spleen	Spleen
6	chr14:69106800-69116000	Weak transcription	Ovary	ovary
7	chr14:69108800-69119000	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr14:69109400-69122400	Weak transcription	Primary B cells from cord blood	blood
9	chr14:69111000-69115400	Weak transcription	Adipose Nuclei	Adipose
10	chr14:69111200-69115400	Weak transcription	Fetal Muscle Leg	muscle
11	chr14:69111200-69116000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr14:69111200-69117200	Weak transcription	Right Ventricle	heart
13	chr14:69111200-69117800	Weak transcription	Fetal Muscle Trunk	muscle
14	chr14:69111400-69117200	Weak transcription	Stomach Smooth Muscle	stomach
15	chr14:69112000-69121600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr14:69112400-69113600	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr14:69112400-69118200	Weak transcription	NH-A	brain
18	chr14:69112600-69113800	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr14:69112800-69113600	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr14:69113000-69116800	Weak transcription	Fetal Heart	heart
21	chr14:69113200-69113600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr14:69113200-69116000	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr14:69113200-69121600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr14:69113400-69113600	Enhancers	HUES48 Cell Line	embryonic stem cell
25	chr14:69113400-69113600	Enhancers	iPS-18 Cell Line	embryonic stem cell
26	chr14:69113400-69115200	Weak transcription	Colon Smooth Muscle	Colon
27	chr14:69113400-69115400	Weak transcription	Fetal Lung	lung
28	chr14:69113400-69115400	Weak transcription	Fetal Stomach	stomach
29	chr14:69113400-69117000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
30	chr14:69113400-69117000	Weak transcription	Rectal Smooth Muscle	rectum
31	chr14:69113400-69117200	Weak transcription	Fetal Intestine Small	intestine
32	chr14:69113400-69118200	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr14:69113400-69118200	Weak transcription	HepG2	liver
34	chr14:69113400-69118200	Weak transcription	HSMM	muscle

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