Variant report

Variant	rs4516148
Chromosome Location	chr14:69106121-69106122
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69104267..69107230-chr14:69123816..69125821,2	MCF-7	breast:

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10143428	1.00[CHB][hapmap]
rs10149893	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10151145	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11623966	1.00[CHB][hapmap]
rs11627234	0.82[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs11628293	1.00[CHB][hapmap]
rs11629144	1.00[CHB][hapmap]
rs17106069	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17829281	1.00[CHB][hapmap]
rs17834977	1.00[CHB][hapmap]
rs4420467	1.00[CHB][hapmap]
rs61095830	0.81[EUR][1000 genomes]
rs7140546	1.00[CHB][hapmap]
rs7143663	1.00[CHB][hapmap]
rs739874	1.00[CHB][hapmap]
rs8009398	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8009601	1.00[CHB][hapmap]
rs999737	1.00[CHB][hapmap]

No data

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69092200-69107000	Enhancers	Fetal Muscle Leg	muscle
2	chr14:69095600-69107400	Enhancers	Fetal Stomach	stomach
3	chr14:69095800-69107800	Weak transcription	Fetal Brain Female	brain
4	chr14:69100800-69107000	Weak transcription	Small Intestine	intestine
5	chr14:69100800-69107800	Weak transcription	Primary B cells from cord blood	blood
6	chr14:69101200-69106400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr14:69101200-69106400	Enhancers	Brain Anterior Caudate	brain
8	chr14:69102200-69106200	Enhancers	Brain Substantia Nigra	brain
9	chr14:69102600-69106400	Enhancers	Brain Hippocampus Middle	brain
10	chr14:69102600-69106600	Enhancers	Colon Smooth Muscle	Colon
11	chr14:69102800-69106200	Enhancers	Fetal Intestine Small	intestine
12	chr14:69102800-69106400	Enhancers	Fetal Kidney	kidney
13	chr14:69102800-69106400	Enhancers	Placenta Amnion	Placenta Amnion
14	chr14:69102800-69106600	Enhancers	Fetal Thymus	thymus
15	chr14:69103000-69106400	Enhancers	Brain Inferior Temporal Lobe	brain
16	chr14:69103200-69106200	Enhancers	Brain Angular Gyrus	brain
17	chr14:69103400-69106200	Enhancers	Primary T cells from cord blood	blood
18	chr14:69103400-69106200	Enhancers	Brain Cingulate Gyrus	brain
19	chr14:69103400-69106200	Enhancers	Lung	lung
20	chr14:69103400-69106400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr14:69103400-69106400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr14:69103400-69106600	Enhancers	Placenta	Placenta
23	chr14:69103400-69106800	Enhancers	Fetal Muscle Trunk	muscle
24	chr14:69103600-69106400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr14:69103600-69106400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
26	chr14:69103800-69106400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr14:69103800-69106400	Enhancers	Primary T cells fromperipheralblood	blood
28	chr14:69103800-69106400	Enhancers	Right Atrium	heart
29	chr14:69104000-69106200	Enhancers	Primary T helper cells PMA-I stimulated	--
30	chr14:69104000-69106200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
31	chr14:69104000-69106200	Enhancers	A549	lung
32	chr14:69104000-69106400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr14:69104000-69106400	Enhancers	Primary monocytes fromperipheralblood	blood
34	chr14:69104000-69106400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
35	chr14:69104000-69106400	Enhancers	Adipose Nuclei	Adipose
36	chr14:69104000-69106400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
37	chr14:69104000-69106400	Enhancers	Monocytes-CD14+_RO01746	blood
38	chr14:69104000-69106400	Enhancers	NHDF-Ad	bronchial
39	chr14:69104000-69106800	Enhancers	Left Ventricle	heart
40	chr14:69104200-69106600	Enhancers	Fetal Heart	heart
41	chr14:69104200-69106600	Enhancers	Skeletal Muscle Male	skeletal muscle
42	chr14:69104400-69106200	Enhancers	Esophagus	oesophagus
43	chr14:69104400-69106200	Enhancers	Rectal Mucosa Donor 31	rectum
44	chr14:69104400-69106400	Enhancers	Breast Myoepithelial Primary Cells	Breast
45	chr14:69104400-69106400	Enhancers	Rectal Mucosa Donor 29	rectum
46	chr14:69104400-69106400	Enhancers	HSMMtube	muscle
47	chr14:69104400-69106600	Enhancers	Duodenum Smooth Muscle	Duodenum
48	chr14:69104400-69106800	Enhancers	Ovary	ovary
49	chr14:69104400-69107000	Enhancers	Psoas Muscle	Psoas
50	chr14:69104600-69106400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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