Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10242108	0.87[CHB][hapmap]
rs10488599	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs10488600	0.86[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs1111418	0.81[CEU][hapmap];0.81[CHB][hapmap];0.81[JPT][hapmap]
rs1364408	0.83[CHB][hapmap];0.90[JPT][hapmap]
rs1424386	0.87[CHB][hapmap]
rs1424546	0.82[CEU][hapmap];0.81[JPT][hapmap]
rs17168815	0.83[JPT][hapmap]
rs17168819	0.82[CHB][hapmap];0.90[JPT][hapmap]
rs2350780	0.87[CHB][hapmap]
rs4475425	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6945230	0.82[CHB][hapmap]
rs6945736	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6963819	0.87[CHB][hapmap]
rs6969811	0.96[CHB][hapmap];0.90[JPT][hapmap];0.93[ASN][1000 genomes]
rs73158705	0.94[ASN][1000 genomes]
rs73158724	0.91[ASN][1000 genomes]
rs73158732	0.81[ASN][1000 genomes]
rs7777727	0.84[CEU][hapmap];0.96[CHB][hapmap];0.84[JPT][hapmap];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7806357	0.82[CHB][hapmap];0.90[JPT][hapmap]
rs960677	0.86[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136558000-136609200	Weak transcription	Left Ventricle	heart
2	chr7:136578600-136584400	Weak transcription	Colon Smooth Muscle	Colon
3	chr7:136578800-136587200	Weak transcription	Stomach Smooth Muscle	stomach
4	chr7:136580600-136585400	Enhancers	Fetal Heart	heart
5	chr7:136581200-136583400	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr7:136581600-136584800	Weak transcription	Rectal Smooth Muscle	rectum

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