The 2.0 version of rSNPBase

Variant report

Variant rs10753217
Chromosome Location chr1:180495003-180495004
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180486000-180499400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:180488000-180500400 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr1:180488600-180497000 Enhancers Placenta Placenta
4 chr1:180491000-180499400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:180491400-180496200 Weak transcription A549 lung
6 chr1:180491400-180496400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:180491400-180499400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:180491600-180511200 Weak transcription Psoas Muscle Psoas
9 chr1:180492000-180495400 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:180492000-180495400 Weak transcription K562 blood
11 chr1:180492200-180495800 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr1:180492400-180496400 Weak transcription NHEK skin
13 chr1:180492400-180499400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:180492400-180503000 Weak transcription Pancreas Pancrea
15 chr1:180492600-180495400 Weak transcription HepG2 liver
16 chr1:180492600-180498000 Weak transcription HSMMtube muscle
17 chr1:180493000-180496200 Weak transcription Hela-S3 cervix
18 chr1:180493400-180496600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:180493800-180495400 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr1:180493800-180497000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:180494000-180495200 Enhancers Fetal Stomach stomach
22 chr1:180494000-180495400 Enhancers Aorta Aorta
23 chr1:180494000-180496800 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr1:180494000-180497200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:180494200-180495200 Enhancers Primary B cells from peripheral blood blood
26 chr1:180494200-180502200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:180494200-180503000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:180494400-180508200 Weak transcription Right Ventricle heart
29 chr1:180494600-180495600 Weak transcription Left Ventricle heart
30 chr1:180494600-180497000 Enhancers Fetal Intestine Small intestine
31 chr1:180494600-180503000 Weak transcription Fetal Lung lung
32 chr1:180494800-180496600 Enhancers HUES6 Cell Line embryonic stem cell
33 chr1:180494800-180497200 Enhancers Fetal Intestine Large intestine
34 chr1:180495000-180495200 Enhancers Brain Hippocampus Middle brain
35 chr1:180495000-180496000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:180495000-180496000 Weak transcription Right Atrium heart
37 chr1:180495000-180496200 Weak transcription HUVEC blood vessel
38 chr1:180495000-180496200 Weak transcription NH-A brain
39 chr1:180495000-180497000 Enhancers Fetal Heart heart
40 chr1:180495000-180497200 Enhancers HMEC breast
41 chr1:180495000-180499200 Weak transcription Adipose Nuclei Adipose
42 chr1:180495000-180499200 Weak transcription Esophagus oesophagus
43 chr1:180495000-180499200 Weak transcription Lung lung
44 chr1:180495000-180502200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:180495000-180503800 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015