Variant report

Variant rs7555087
Chromosome Location chr1:180490877-180490878
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180481800-180491200 Weak transcription H1 Cell Line embryonic stem cell
2 chr1:180485800-180491200 Weak transcription HSMMtube muscle
3 chr1:180486000-180493400 Weak transcription Fetal Stomach stomach
4 chr1:180486000-180499400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr1:180486400-180493800 Weak transcription Fetal Lung lung
6 chr1:180488000-180500400 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr1:180488200-180492200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:180488600-180497000 Enhancers Placenta Placenta
9 chr1:180488800-180491800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:180489400-180494400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:180489800-180494400 Weak transcription HUVEC blood vessel
12 chr1:180490400-180491000 Enhancers Fetal Heart heart
13 chr1:180490400-180492000 Enhancers Placenta Amnion Placenta Amnion
14 chr1:180490600-180491000 Enhancers NHEK skin
15 chr1:180490600-180491200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:180490600-180491200 Enhancers Skeletal Muscle Female skeletal muscle
17 chr1:180490600-180491200 Enhancers Hela-S3 cervix
18 chr1:180490600-180491200 Enhancers K562 blood
19 chr1:180490600-180491400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:180490600-180491400 Enhancers Right Ventricle heart
21 chr1:180490600-180491400 Enhancers A549 lung
22 chr1:180490600-180491600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:180490600-180491600 Enhancers Liver Liver
24 chr1:180490600-180491600 Enhancers Psoas Muscle Psoas
25 chr1:180490600-180491600 Enhancers Right Atrium heart
26 chr1:180490600-180491800 Enhancers Pancreas Pancrea
27 chr1:180490600-180492000 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr1:180490600-180492000 Enhancers H9 Cell Line embryonic stem cell
29 chr1:180490600-180492000 Enhancers HUES6 Cell Line embryonic stem cell
30 chr1:180490600-180492400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:180490600-180492600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:180490600-180492800 Enhancers HMEC breast
33 chr1:180490800-180491000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr1:180490800-180491400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr1:180490800-180491400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:180490800-180491400 Enhancers Fetal Muscle Leg muscle
37 chr1:180490800-180491400 Weak transcription Left Ventricle heart
38 chr1:180490800-180491600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:180490800-180491600 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr1:180490800-180491800 Flanking Active TSS HepG2 liver
41 chr1:180490800-180492000 Enhancers iPS-18 Cell Line embryonic stem cell
42 chr1:180490800-180492000 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr1:180490800-180492200 Enhancers HUES48 Cell Line embryonic stem cell
44 chr1:180490800-180492600 Enhancers Skeletal Muscle Male skeletal muscle
45 chr1:180490800-180493800 Weak transcription Lung lung

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