The 2.0 version of rSNPBase

Variant report

Variant rs10157891
Chromosome Location chr1:180430608-180430609
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180379000-180430800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr1:180392600-180446200 Weak transcription K562 blood
3 chr1:180403400-180431200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:180403400-180448000 Weak transcription HMEC breast
5 chr1:180404200-180431800 Weak transcription NHEK skin
6 chr1:180404400-180469000 Weak transcription Pancreas Pancrea
7 chr1:180417600-180431200 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr1:180418000-180431200 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr1:180418400-180430800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:180421000-180431200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:180421000-180431800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:180421000-180448000 Weak transcription HSMM muscle
13 chr1:180421200-180431200 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:180421200-180431200 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:180421200-180431400 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr1:180421200-180431800 Weak transcription A549 lung
17 chr1:180421200-180451600 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:180421400-180431000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:180421600-180431200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:180421600-180431200 Weak transcription Ovary ovary
21 chr1:180424400-180430800 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr1:180425600-180431400 Weak transcription Colon Smooth Muscle Colon
23 chr1:180425800-180457600 Weak transcription Aorta Aorta
24 chr1:180426600-180431000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:180426600-180431000 Weak transcription Duodenum Mucosa Duodenum
26 chr1:180426600-180431600 Weak transcription Dnd41 blood
27 chr1:180426800-180431400 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr1:180427400-180448200 Weak transcription Osteobl bone
29 chr1:180428000-180470000 Weak transcription Rectal Smooth Muscle rectum
30 chr1:180428600-180438000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr1:180429400-180431400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
32 chr1:180429400-180435200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:180429600-180431000 ZNF genes & repeats Fetal Muscle Leg muscle
34 chr1:180429600-180431200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr1:180429600-180431400 ZNF genes & repeats Primary hematopoietic stem cells blood
36 chr1:180429600-180444600 Weak transcription Esophagus oesophagus
37 chr1:180429600-180455000 Weak transcription Left Ventricle heart
38 chr1:180429800-180431000 Weak transcription H1 Cell Line embryonic stem cell
39 chr1:180429800-180431600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
40 chr1:180430200-180430800 Weak transcription Lung lung
41 chr1:180430200-180431800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:180430200-180432600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:180430200-180454600 Weak transcription Thymus Thymus
44 chr1:180430400-180430800 ZNF genes & repeats Fetal Brain Female brain
45 chr1:180430400-180431400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:180430400-180431400 ZNF genes & repeats Fetal Stomach stomach
47 chr1:180430400-180431800 ZNF genes & repeats Fetal Lung lung
48 chr1:180430400-180432000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:180430600-180431000 ZNF genes & repeats Primary B cells from cord blood blood
50 chr1:180430600-180431200 ZNF genes & repeats Brain Hippocampus Middle brain

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Last update: Aug 31, 2015