The 2.0 version of rSNPBase

Variant report

Variant rs6682067
Chromosome Location chr1:180400297-180400298
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180341200-180401400 Weak transcription Osteobl bone
2 chr1:180349400-180407000 Weak transcription Esophagus oesophagus
3 chr1:180355200-180402600 Weak transcription HMEC breast
4 chr1:180356800-180406200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:180356800-180407000 Weak transcription Aorta Aorta
6 chr1:180361400-180407600 Weak transcription HepG2 liver
7 chr1:180364400-180401600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:180364600-180401000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:180365000-180401000 Weak transcription Ovary ovary
10 chr1:180365200-180420600 Weak transcription A549 lung
11 chr1:180365400-180402600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr1:180374600-180404000 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr1:180376200-180407400 Weak transcription NHLF lung
14 chr1:180379000-180430800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:180379800-180406000 Weak transcription Left Ventricle heart
16 chr1:180380400-180401000 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:180380400-180408000 Weak transcription Primary T cells fromperipheralblood blood
18 chr1:180381200-180402800 Weak transcription NHEK skin
19 chr1:180381200-180406400 Weak transcription Fetal Stomach stomach
20 chr1:180381400-180401000 Weak transcription HSMM muscle
21 chr1:180382400-180401000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:180382400-180410800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr1:180382600-180400800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:180382600-180402800 Weak transcription Placenta Placenta
25 chr1:180382600-180406000 Weak transcription Dnd41 blood
26 chr1:180382600-180406400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:180382600-180406600 Weak transcription Hela-S3 cervix
28 chr1:180385600-180401600 Weak transcription Fetal Kidney kidney
29 chr1:180389600-180406000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:180389800-180410400 Weak transcription Fetal Intestine Large intestine
31 chr1:180390200-180401600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:180391000-180409000 Weak transcription Primary T cells from cord blood blood
33 chr1:180391200-180410200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:180391400-180404800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:180391600-180403800 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:180391800-180402800 Weak transcription Fetal Intestine Small intestine
37 chr1:180391800-180404000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:180391800-180408000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:180392000-180403000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:180392200-180405400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:180392600-180446200 Weak transcription K562 blood
42 chr1:180394400-180407000 Weak transcription Psoas Muscle Psoas
43 chr1:180394400-180407800 Weak transcription Primary B cells from peripheral blood blood
44 chr1:180394600-180405000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:180394600-180407000 Weak transcription Brain Germinal Matrix brain
46 chr1:180394800-180401600 Weak transcription NHDF-Ad bronchial
47 chr1:180394800-180403000 Weak transcription H9 Cell Line embryonic stem cell
48 chr1:180394800-180420200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:180395800-180402800 Weak transcription Fetal Brain Female brain
50 chr1:180396000-180401400 Weak transcription HUES48 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015