The 2.0 version of rSNPBase

Variant report

Variant rs10914019
Chromosome Location chr1:180494646-180494647
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180486000-180499400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:180488000-180500400 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr1:180488600-180497000 Enhancers Placenta Placenta
4 chr1:180491000-180499400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:180491400-180496200 Weak transcription A549 lung
6 chr1:180491400-180496400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:180491400-180499400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:180491600-180511200 Weak transcription Psoas Muscle Psoas
9 chr1:180492000-180494800 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr1:180492000-180495400 Weak transcription H9 Cell Line embryonic stem cell
11 chr1:180492000-180495400 Weak transcription K562 blood
12 chr1:180492200-180494800 Weak transcription Fetal Intestine Large intestine
13 chr1:180492200-180495800 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr1:180492400-180496400 Weak transcription NHEK skin
15 chr1:180492400-180499400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:180492400-180503000 Weak transcription Pancreas Pancrea
17 chr1:180492600-180495400 Weak transcription HepG2 liver
18 chr1:180492600-180498000 Weak transcription HSMMtube muscle
19 chr1:180493000-180496200 Weak transcription Hela-S3 cervix
20 chr1:180493200-180495000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:180493400-180495000 Enhancers Skeletal Muscle Female skeletal muscle
22 chr1:180493400-180496600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:180493800-180495000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:180493800-180495000 Enhancers Lung lung
25 chr1:180493800-180495000 Enhancers Right Atrium heart
26 chr1:180493800-180495400 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr1:180493800-180497000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:180494000-180495000 Enhancers Esophagus oesophagus
29 chr1:180494000-180495000 Enhancers Placenta Amnion Placenta Amnion
30 chr1:180494000-180495200 Enhancers Fetal Stomach stomach
31 chr1:180494000-180495400 Enhancers Aorta Aorta
32 chr1:180494000-180496800 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr1:180494000-180497200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:180494200-180495000 Enhancers Primary monocytes fromperipheralblood blood
35 chr1:180494200-180495000 Enhancers Fetal Muscle Trunk muscle
36 chr1:180494200-180495000 Enhancers Fetal Thymus thymus
37 chr1:180494200-180495200 Enhancers Primary B cells from peripheral blood blood
38 chr1:180494200-180502200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:180494200-180503000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:180494400-180495000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:180494400-180495000 Enhancers HUVEC blood vessel
42 chr1:180494400-180508200 Weak transcription Right Ventricle heart
43 chr1:180494600-180495000 Enhancers Primary neutrophils fromperipheralblood blood
44 chr1:180494600-180495000 Enhancers Primary B cells from cord blood blood
45 chr1:180494600-180495000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:180494600-180495000 Enhancers Adipose Nuclei Adipose
47 chr1:180494600-180495000 Weak transcription Fetal Heart heart
48 chr1:180494600-180495000 Flanking Active TSS HMEC breast
49 chr1:180494600-180495600 Weak transcription Left Ventricle heart
50 chr1:180494600-180497000 Enhancers Fetal Intestine Small intestine

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Last update: Aug 31, 2015