The 2.0 version of rSNPBase

Variant report

Variant rs4652506
Chromosome Location chr1:180496630-180496631
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180486000-180499400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:180488000-180500400 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr1:180488600-180497000 Enhancers Placenta Placenta
4 chr1:180491000-180499400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:180491400-180499400 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:180491600-180511200 Weak transcription Psoas Muscle Psoas
7 chr1:180492400-180499400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:180492400-180503000 Weak transcription Pancreas Pancrea
9 chr1:180492600-180498000 Weak transcription HSMMtube muscle
10 chr1:180493800-180497000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:180494000-180496800 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr1:180494000-180497200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:180494200-180502200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:180494200-180503000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr1:180494400-180508200 Weak transcription Right Ventricle heart
16 chr1:180494600-180497000 Enhancers Fetal Intestine Small intestine
17 chr1:180494600-180503000 Weak transcription Fetal Lung lung
18 chr1:180494800-180497200 Enhancers Fetal Intestine Large intestine
19 chr1:180495000-180497000 Enhancers Fetal Heart heart
20 chr1:180495000-180497200 Enhancers HMEC breast
21 chr1:180495000-180499200 Weak transcription Adipose Nuclei Adipose
22 chr1:180495000-180499200 Weak transcription Esophagus oesophagus
23 chr1:180495000-180499200 Weak transcription Lung lung
24 chr1:180495000-180502200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:180495000-180503800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:180495200-180502600 Weak transcription Brain Hippocampus Middle brain
27 chr1:180495400-180496800 Enhancers HepG2 liver
28 chr1:180495400-180497000 Enhancers K562 blood
29 chr1:180495600-180496800 Enhancers Left Ventricle heart
30 chr1:180496000-180496800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:180496000-180497000 Enhancers HSMM muscle
32 chr1:180496200-180496800 Enhancers Hela-S3 cervix
33 chr1:180496200-180497000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:180496200-180497000 Enhancers NH-A brain
35 chr1:180496200-180497200 Enhancers A549 lung
36 chr1:180496200-180497200 Enhancers HUVEC blood vessel
37 chr1:180496200-180498000 Enhancers Muscle Satellite Cultured Cells --
38 chr1:180496400-180496800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:180496400-180496800 Enhancers Cortex derived primary cultured neurospheres brain
40 chr1:180496400-180497000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr1:180496400-180497000 Enhancers NHEK skin
42 chr1:180496400-180497000 Enhancers Osteobl bone
43 chr1:180496400-180497200 Enhancers Aorta Aorta
44 chr1:180496400-180499400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:180496600-180497000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:180496600-180499200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:180496600-180499400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:180496600-180499600 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr1:180496600-180508000 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015