Variant report

Variant rs7522928
Chromosome Location chr1:180491201-180491202
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180486000-180493400 Weak transcription Fetal Stomach stomach
2 chr1:180486000-180499400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr1:180486400-180493800 Weak transcription Fetal Lung lung
4 chr1:180488000-180500400 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr1:180488200-180492200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:180488600-180497000 Enhancers Placenta Placenta
7 chr1:180488800-180491800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:180489400-180494400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:180489800-180494400 Weak transcription HUVEC blood vessel
10 chr1:180490400-180492000 Enhancers Placenta Amnion Placenta Amnion
11 chr1:180490600-180491400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:180490600-180491400 Enhancers Right Ventricle heart
13 chr1:180490600-180491400 Enhancers A549 lung
14 chr1:180490600-180491600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:180490600-180491600 Enhancers Liver Liver
16 chr1:180490600-180491600 Enhancers Psoas Muscle Psoas
17 chr1:180490600-180491600 Enhancers Right Atrium heart
18 chr1:180490600-180491800 Enhancers Pancreas Pancrea
19 chr1:180490600-180492000 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr1:180490600-180492000 Enhancers H9 Cell Line embryonic stem cell
21 chr1:180490600-180492000 Enhancers HUES6 Cell Line embryonic stem cell
22 chr1:180490600-180492400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:180490600-180492600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:180490600-180492800 Enhancers HMEC breast
25 chr1:180490800-180491400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:180490800-180491400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:180490800-180491400 Enhancers Fetal Muscle Leg muscle
28 chr1:180490800-180491400 Weak transcription Left Ventricle heart
29 chr1:180490800-180491600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:180490800-180491600 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr1:180490800-180491800 Flanking Active TSS HepG2 liver
32 chr1:180490800-180492000 Enhancers iPS-18 Cell Line embryonic stem cell
33 chr1:180490800-180492000 Enhancers iPS-20b Cell Line embryonic stem cell
34 chr1:180490800-180492200 Enhancers HUES48 Cell Line embryonic stem cell
35 chr1:180490800-180492600 Enhancers Skeletal Muscle Male skeletal muscle
36 chr1:180490800-180493800 Weak transcription Lung lung
37 chr1:180491000-180492000 Enhancers HUES64 Cell Line embryonic stem cell
38 chr1:180491000-180492000 Flanking Active TSS NHEK skin
39 chr1:180491000-180499400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:180491200-180491400 Enhancers ES-WA7 Cell Line embryonic stem cell
41 chr1:180491200-180491400 Enhancers Fetal Heart heart
42 chr1:180491200-180491400 Flanking Active TSS Hela-S3 cervix
43 chr1:180491200-180491600 Enhancers Stomach Mucosa stomach
44 chr1:180491200-180491600 Flanking Active TSS HSMMtube muscle
45 chr1:180491200-180491600 Flanking Active TSS K562 blood
46 chr1:180491200-180491800 Enhancers H1 Cell Line embryonic stem cell
47 chr1:180491200-180491800 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr1:180491200-180491800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
49 chr1:180491200-180492000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr1:180491200-180492000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin

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