Variant report

Variant	rs10767529
Chromosome Location	chr11:26452734-26452735
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10047414	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10047464	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10742138	0.83[JPT][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10742139	0.95[CEU][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10767526	0.87[CEU][hapmap]
rs10767527	0.90[CEU][hapmap]
rs10767528	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10767530	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10767531	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10767532	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10767535	1.00[CEU][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834974	0.91[CEU][hapmap]
rs10834982	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11029552	0.95[CEU][hapmap]
rs11029555	0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11029556	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11029557	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11500182	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11820893	0.92[ASN][1000 genomes]
rs11824236	0.81[JPT][hapmap]
rs12273739	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12275424	0.89[ASN][1000 genomes]
rs12277506	0.89[ASN][1000 genomes]
rs12287530	0.82[CHB][hapmap]
rs12288668	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12288844	0.89[ASN][1000 genomes]
rs12575612	0.87[ASN][1000 genomes]
rs13377552	0.83[CHB][hapmap]
rs1381174	0.95[CEU][hapmap]
rs1563958	0.91[CEU][hapmap]
rs16915655	0.91[CEU][hapmap]
rs2029712	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2126183	0.91[CEU][hapmap]
rs2350206	0.91[CEU][hapmap]
rs4032918	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4339995	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4489698	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4923359	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57857863	1.00[ASN][1000 genomes]
rs7102859	0.86[CEU][hapmap]
rs7107402	0.96[CEU][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7107710	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7107960	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7108703	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7109872	0.88[ASN][1000 genomes]
rs7111512	0.91[ASN][1000 genomes]
rs7113405	0.91[CEU][hapmap]
rs7115101	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7123118	0.91[CEU][hapmap];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7123359	0.96[ASN][1000 genomes]
rs7925120	0.95[CEU][hapmap]
rs7925575	1.00[ASN][1000 genomes]
rs7936431	0.91[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422406	chr11:26329870-26473641	Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26447200-26463200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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