Variant report

Variant	rs10882743
Chromosome Location	chr10:97961748-97961749
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10491070	1.00[JPT][hapmap]
rs10509700	1.00[JPT][hapmap]
rs10509701	1.00[JPT][hapmap]
rs10509703	1.00[JPT][hapmap]
rs10882718	1.00[JPT][hapmap]
rs10882723	1.00[JPT][hapmap]
rs10882728	1.00[JPT][hapmap]
rs11188575	1.00[JPT][hapmap]
rs11188596	1.00[JPT][hapmap]
rs11188604	1.00[JPT][hapmap]
rs11188622	1.00[JPT][hapmap]
rs11188627	1.00[JPT][hapmap]
rs11188635	1.00[JPT][hapmap]
rs11188656	1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11188661	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11188662	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11591959	1.00[JPT][hapmap]
rs11594595	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11595809	1.00[JPT][hapmap]
rs11598546	1.00[JPT][hapmap]
rs11598837	1.00[JPT][hapmap]
rs11599170	1.00[JPT][hapmap]
rs12354644	1.00[JPT][hapmap]
rs12359842	0.83[CEU][hapmap];1.00[JPT][hapmap]
rs12761705	1.00[JPT][hapmap]
rs12762814	0.84[EUR][1000 genomes]
rs2168733	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3961944	1.00[JPT][hapmap]
rs713070	1.00[JPT][hapmap]
rs7896077	1.00[JPT][hapmap]

SNP	Gene	Cis/trans	Tissue	Source
rs10882743	ZNF518A	cis	cerebellar cortex	BrainEAC

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97947400-97961800	Weak transcription	Pancreas	Pancrea
2	chr10:97948000-97963800	Weak transcription	Placenta	Placenta
3	chr10:97948200-97963600	Weak transcription	Gastric	stomach
4	chr10:97948200-97979000	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr10:97948400-97974200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr10:97948600-97962800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr10:97948600-97969400	Weak transcription	Fetal Stomach	stomach
8	chr10:97949600-97989200	Strong transcription	Liver	Liver
9	chr10:97950000-97969400	Weak transcription	Esophagus	oesophagus
10	chr10:97952000-98010200	Weak transcription	Fetal Kidney	kidney
11	chr10:97952200-97971800	Strong transcription	Primary B cells from cord blood	blood
12	chr10:97953600-97967000	Weak transcription	Colonic Mucosa	Colon
13	chr10:97953600-97967800	Strong transcription	GM12878-XiMat	blood
14	chr10:97954600-97964200	Weak transcription	Adipose Nuclei	Adipose
15	chr10:97955400-97971800	Strong transcription	Primary B cells from peripheral blood	blood
16	chr10:97957000-97964400	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr10:97957600-97988400	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr10:97958800-97971400	Strong transcription	Duodenum Mucosa	Duodenum
19	chr10:97958800-97976400	Strong transcription	Fetal Intestine Large	intestine
20	chr10:97959000-97988800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr10:97959600-97961800	Weak transcription	Spleen	Spleen
22	chr10:97959800-97968000	Strong transcription	Rectal Mucosa Donor 29	rectum
23	chr10:97960400-97967800	Weak transcription	Brain Cingulate Gyrus	brain
24	chr10:97960600-97966200	Strong transcription	Rectal Mucosa Donor 31	rectum
25	chr10:97961000-97967200	Weak transcription	Rectal Smooth Muscle	rectum
26	chr10:97961000-97985600	Weak transcription	Aorta	Aorta
27	chr10:97961600-97964600	Strong transcription	Fetal Intestine Small	intestine

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