Variant report

Variant	rs10899311
Chromosome Location	chr11:76629991-76629992
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:76629872..76631321-chr11:76756709..76758148,6	K562	blood:
2	chr11:76517508..76519118-chr11:76629396..76631998,9	MCF-7	breast:
3	chr11:76445248..76448071-chr11:76628717..76631883,4	MCF-7	breast:
4	chr11:76573371..76575582-chr11:76628469..76631182,2	MCF-7	breast:
5	chr11:76493335..76495613-chr11:76628217..76631203,2	MCF-7	breast:
6	chr11:76498398..76500983-chr11:76629016..76630524,2	MCF-7	breast:
7	chr11:76444662..76445640-chr11:76629853..76630608,2	MCF-7	breast:
8	chr11:76518111..76519175-chr11:76629549..76632027,10	K562	blood:
9	chr11:76521037..76521914-chr11:76629597..76630398,3	K562	blood:
10	chr11:76629857..76631654-chr11:76756070..76758105,23	MCF-7	breast:
11	chr11:76570391..76573422-chr11:76629389..76632436,3	MCF-7	breast:
12	chr11:76520927..76521861-chr11:76629465..76631202,7	MCF-7	breast:
13	chr11:76627984..76630110-chr11:76852373..76855072,2	K562	blood:
14	chr11:76520919..76522194-chr11:76629424..76630709,10	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000182704	Chromatin interaction
ENSG00000255100	Chromatin interaction
ENSG00000078124	Chromatin interaction

Extended variants
information (count: 228 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:227)

rs_ID	r²[population]
rs10082568	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1025815	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10431154	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10431181	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10431182	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10736811	0.82[EUR][1000 genomes]
rs10736812	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10751262	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10751263	0.82[EUR][1000 genomes]
rs10751264	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10751267	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10751268	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793201	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10793204	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10793205	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10793206	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793207	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10793209	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10793210	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs10793211	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793212	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793213	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793214	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793215	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793216	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10793217	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793218	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793219	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793220	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793221	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793223	0.94[CEU][hapmap];0.87[JPT][hapmap]
rs10793227	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10793229	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10793230	1.00[CEU][hapmap];0.84[CHB][hapmap];0.81[JPT][hapmap]
rs10793231	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10793232	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10899292	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899294	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899295	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10899297	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899298	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899301	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899302	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899305	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899307	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10899308	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899310	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899312	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899313	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899315	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899316	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10899320	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10899321	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10899324	0.85[ASN][1000 genomes]
rs10899325	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899327	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899328	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899329	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899330	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899332	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899340	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs10899341	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs10899344	0.88[CEU][hapmap];0.83[CHB][hapmap]
rs11236977	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11236999	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11237023	0.92[ASN][1000 genomes]
rs11237025	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11237027	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11237029	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11237031	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11237035	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11533271	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11535857	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11537264	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12222825	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12223659	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs12292156	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12718490	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12788158	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12794575	0.93[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12796913	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12807735	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1356455	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1356456	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1372045	0.87[CEU][hapmap]
rs1372046	0.93[CEU][hapmap];0.89[CHB][hapmap];0.89[JPT][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1474087	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1517905	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1517906	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1517907	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs1517909	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs1589126	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs1607285	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1816748	0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1907295	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1914599	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1914600	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1945083	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs1965151	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1980204	1.00[CEU][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1980205	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1986000	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2043986	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2119456	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2119457	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2119458	0.82[EUR][1000 genomes]
rs2156770	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs2165404	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2203755	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2372386	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2372388	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2826	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs3740765	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs3740767	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs3781697	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs3824889	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs4145048	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs4367972	0.80[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4379869	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4457775	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4460836	1.00[CEU][hapmap];0.84[CHB][hapmap];0.80[JPT][hapmap]
rs4471450	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4479014	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4488228	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4488229	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4556574	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4586198	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4604914	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4944128	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4944129	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4944132	1.00[CEU][hapmap]
rs4944134	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs4945115	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4945116	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945118	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945119	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945124	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945125	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945129	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs4945132	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs55956901	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56955124	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs591043	0.87[CEU][hapmap];0.84[CHB][hapmap]
rs603610	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6592671	0.87[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.90[ASN][1000 genomes]
rs6592672	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6592675	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6592676	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6592677	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6592679	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6592680	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6592682	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6592683	1.00[CEU][hapmap];0.89[CHB][hapmap];0.84[EUR][1000 genomes]
rs6592684	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6592685	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6592687	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6592691	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7101593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7102485	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7103308	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7103500	1.00[CEU][hapmap];0.81[CHB][hapmap];0.82[EUR][1000 genomes]
rs7105895	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7106611	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7106625	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7110532	1.00[CEU][hapmap];0.89[CHB][hapmap]
rs7110849	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7113282	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7113290	0.93[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7114827	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7115092	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7116513	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7116800	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7116872	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7117545	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7117682	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7118762	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7119361	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7120215	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7121273	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7122736	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7123496	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7123694	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7123723	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7126666	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7127936	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7128770	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7129147	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7924605	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7924613	0.93[CEU][hapmap]
rs7924888	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7925135	0.93[CEU][hapmap];0.83[CHB][hapmap]
rs7925652	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7925774	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7927367	1.00[CEU][hapmap];0.88[CHB][hapmap]
rs7927658	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7927731	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7929837	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7930307	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7931561	0.93[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7931646	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7931869	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs7932288	0.93[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7933248	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7933351	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7937883	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7940782	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs7942574	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7942646	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7943913	1.00[CEU][hapmap];0.84[CHB][hapmap];0.82[JPT][hapmap];0.86[ASN][1000 genomes]
rs7947809	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7949041	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7951501	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9326485	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs938809	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs938810	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs949339	1.00[CEU][hapmap];0.84[CHB][hapmap]
rs949340	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs963704	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs963705	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs964521	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9666315	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9666322	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9795148	0.84[ASN][1000 genomes]
rs9795229	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9795281	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9795388	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9795398	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518920	chr11:76573016-76637651	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76597000-76631000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr11:76613600-76631200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr11:76615600-76631200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr11:76617800-76630000	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr11:76617800-76630000	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr11:76618200-76637600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr11:76618600-76630000	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr11:76622600-76630000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr11:76622600-76631200	Weak transcription	Spleen	Spleen
10	chr11:76622800-76631200	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr11:76623000-76630000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr11:76626600-76631200	Weak transcription	Esophagus	oesophagus
13	chr11:76627400-76631600	Enhancers	K562	blood
14	chr11:76627800-76630000	Weak transcription	Primary T cells from cord blood	blood
15	chr11:76628000-76630000	Weak transcription	Liver	Liver
16	chr11:76628000-76637600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr11:76628200-76630000	Weak transcription	Stomach Mucosa	stomach
18	chr11:76628400-76630800	Weak transcription	Fetal Intestine Small	intestine
19	chr11:76628400-76630800	Weak transcription	HepG2	liver
20	chr11:76629000-76631400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr11:76629200-76630000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr11:76629400-76630000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr11:76629400-76630600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr11:76629400-76631600	Enhancers	Brain Substantia Nigra	brain
25	chr11:76629800-76630000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr11:76629800-76630000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr11:76629800-76630000	Enhancers	Primary B cells from cord blood	blood
28	chr11:76629800-76630000	Flanking Active TSS	Brain Anterior Caudate	brain
29	chr11:76629800-76630000	Enhancers	A549	lung
30	chr11:76629800-76630000	Enhancers	HMEC	breast
31	chr11:76629800-76630000	Flanking Active TSS	NHDF-Ad	bronchial
32	chr11:76629800-76630000	Active TSS	NHEK	skin
33	chr11:76629800-76630000	Enhancers	Osteobl	bone
34	chr11:76629800-76630200	Enhancers	Brain Angular Gyrus	brain
35	chr11:76629800-76630200	Active TSS	Brain Cingulate Gyrus	brain
36	chr11:76629800-76630200	Active TSS	Brain Inferior Temporal Lobe	brain
37	chr11:76629800-76630200	Enhancers	Fetal Intestine Large	intestine
38	chr11:76629800-76630200	Active TSS	Pancreatic Islets	Pancreatic Islet
39	chr11:76629800-76630400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr11:76629800-76630400	Enhancers	Fetal Stomach	stomach
41	chr11:76629800-76631400	Enhancers	HUVEC	blood vessel
42	chr11:76629800-76631600	Enhancers	Adipose Nuclei	Adipose

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