Variant report

Variant	rs10912635
Chromosome Location	chr1:173503037-173503038
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:173496493..173499619-chr1:173501510..173504618,3	K562	blood:
2	chr1:173496692..173499395-chr1:173502096..173503958,2	MCF-7	breast:
3	chr1:173496870..173499125-chr1:173501747..173503656,2	K562	blood:
4	chr1:173502929..173505127-chr1:173522684..173524463,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000238272	Chromatin interaction

Extended variants
information (count: 66 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs1024266	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10399838	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10494490	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10737303	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10798283	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10798284	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10798285	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10912624	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10912625	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10912626	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10912632	0.91[AMR][1000 genomes]
rs10912634	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10912636	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10912641	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10912642	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10912643	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10912651	0.82[AMR][1000 genomes]
rs11582670	0.84[AMR][1000 genomes]
rs12026427	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12026637	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12026677	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12026993	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12027451	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12027495	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12033623	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12034341	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12034533	0.91[AMR][1000 genomes]
rs12035105	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12037210	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12041114	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12077271	0.81[ASN][1000 genomes]
rs12406352	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12406500	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12565753	0.81[ASN][1000 genomes]
rs12745058	0.81[ASN][1000 genomes]
rs1461014	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1461023	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1547155	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1547156	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16846113	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16846206	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1886639	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1925340	0.91[AMR][1000 genomes]
rs2017323	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2422433	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35607505	0.81[ASN][1000 genomes]
rs4336887	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4916365	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4916368	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60043192	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6425248	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6425249	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6675929	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6687872	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6696443	0.81[ASN][1000 genomes]
rs6702320	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72709325	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs728908	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7413754	0.81[ASN][1000 genomes]
rs745573	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs745574	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7516544	0.81[ASN][1000 genomes]
rs7520814	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs898657	0.84[AMR][1000 genomes]
rs898658	0.82[AMR][1000 genomes]
rs898659	0.82[AMR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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