The 2.0 version of rSNPBase

Variant report

Variant rs1547156
Chromosome Location chr1:173501410-173501411
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173496400-173501800 Enhancers Cortex derived primary cultured neurospheres brain
2 chr1:173496800-173501600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr1:173499000-173501600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:173500000-173501600 Enhancers iPS-20b Cell Line embryonic stem cell
5 chr1:173500000-173501600 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr1:173500000-173501600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:173500000-173501600 Enhancers Colon Smooth Muscle Colon
8 chr1:173500600-173501600 Weak transcription Brain Cingulate Gyrus brain
9 chr1:173500600-173501800 Enhancers Brain Hippocampus Middle brain
10 chr1:173500800-173501800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:173500800-173501800 Active TSS Stomach Smooth Muscle stomach
12 chr1:173501000-173501600 Enhancers Dnd41 blood
13 chr1:173501000-173502000 Active TSS Duodenum Smooth Muscle Duodenum
14 chr1:173501000-173502200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr1:173501000-173502200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:173501200-173501600 Enhancers Stomach Mucosa stomach
17 chr1:173501200-173501800 Active TSS Rectal Smooth Muscle rectum
18 chr1:173501200-173502000 Enhancers Primary T helper cells fromperipheralblood blood
19 chr1:173501400-173501600 Active TSS Primary T helper naive cells fromperipheralblood blood
20 chr1:173501400-173501800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:173501400-173501800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:173501400-173501800 Active TSS Adipose Nuclei Adipose
23 chr1:173501400-173502000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
24 chr1:173501400-173502200 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr1:173501400-173502400 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015