Variant report
Variant | rs10912656 |
---|---|
Chromosome Location | chr1:173603912-173603913 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:173602098..173604115-chr1:173674279..173675875,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10798282 | 0.82[CHB][hapmap] |
rs10798283 | 0.80[AMR][1000 genomes] |
rs10798295 | 0.91[CHB][hapmap] |
rs10912632 | 0.87[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs10912634 | 0.80[AMR][1000 genomes] |
rs10912651 | 0.83[AMR][1000 genomes] |
rs10912660 | 0.83[ASN][1000 genomes] |
rs11578058 | 0.86[MKK][hapmap];0.91[TSI][hapmap] |
rs11582670 | 0.81[AMR][1000 genomes] |
rs12026427 | 0.80[AMR][1000 genomes] |
rs12033623 | 0.80[AMR][1000 genomes] |
rs12034341 | 0.80[AMR][1000 genomes] |
rs12034533 | 0.87[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs12035105 | 0.80[AMR][1000 genomes] |
rs12037210 | 0.93[MKK][hapmap] |
rs12067170 | 0.84[ASN][1000 genomes] |
rs12075071 | 0.84[ASN][1000 genomes] |
rs12092383 | 1.00[CHB][hapmap];0.80[JPT][hapmap];0.81[ASN][1000 genomes] |
rs12140760 | 0.82[CHB][hapmap] |
rs12406500 | 0.80[AMR][1000 genomes] |
rs1461023 | 0.80[AMR][1000 genomes] |
rs1547156 | 0.80[AMR][1000 genomes] |
rs16846113 | 0.80[AMR][1000 genomes] |
rs1925340 | 0.87[AMR][1000 genomes] |
rs2901747 | 0.81[AMR][1000 genomes] |
rs2901748 | 0.81[AMR][1000 genomes] |
rs34906768 | 0.94[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs4336887 | 0.81[AMR][1000 genomes] |
rs4382766 | 0.82[CHB][hapmap] |
rs4916358 | 0.82[CHB][hapmap] |
rs4916362 | 0.82[CHB][hapmap] |
rs4916368 | 0.80[AMR][1000 genomes] |
rs57592568 | 0.84[ASN][1000 genomes] |
rs6675929 | 0.80[AMR][1000 genomes] |
rs6702320 | 0.80[AMR][1000 genomes] |
rs6702835 | 0.87[CHB][hapmap] |
rs72709325 | 0.80[AMR][1000 genomes] |
rs728908 | 0.80[AMR][1000 genomes] |
rs7314 | 0.87[CHB][hapmap] |
rs7365380 | 0.93[ASN][1000 genomes] |
rs745573 | 0.80[AMR][1000 genomes] |
rs745574 | 0.80[AMR][1000 genomes] |
rs7537938 | 0.82[CHB][hapmap] |
rs7540065 | 0.87[CHB][hapmap] |
rs7542910 | 0.85[ASN][1000 genomes] |
rs7552939 | 0.91[CHB][hapmap] |
rs898657 | 0.81[AMR][1000 genomes] |
rs9425718 | 0.82[CHB][hapmap] |
rs969029 | 0.86[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:173598000-173607000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
2 | chr1:173603000-173606200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |