Variant report

Variant	rs10994004
Chromosome Location	chr10:61536610-61536611
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs10821593	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10994005	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10994021	0.88[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10994022	0.93[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10994026	0.84[JPT][hapmap]
rs10994027	0.84[JPT][hapmap]
rs10994030	0.83[JPT][hapmap]
rs10994031	0.83[JPT][hapmap]
rs1149660	0.83[JPT][hapmap]
rs11817729	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12242758	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12243559	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12261734	0.87[ASN][1000 genomes]
rs12267686	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1664284	0.83[JPT][hapmap]
rs1664285	0.83[JPT][hapmap]
rs16914233	0.83[JPT][hapmap]
rs1709342	0.83[JPT][hapmap]
rs1709343	0.83[JPT][hapmap]
rs1709345	0.83[JPT][hapmap]
rs1871637	0.83[JPT][hapmap]
rs1871638	0.83[JPT][hapmap]
rs1949257	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2120989	0.84[JPT][hapmap]
rs2120990	0.84[JPT][hapmap]
rs2271562	0.87[JPT][hapmap]
rs2440926	0.84[JPT][hapmap]
rs2458663	0.83[JPT][hapmap]
rs3793882	0.86[ASN][1000 genomes]
rs3844161	0.83[JPT][hapmap]
rs3851247	0.83[JPT][hapmap]
rs3999569	0.84[JPT][hapmap]
rs3999570	0.83[JPT][hapmap]
rs4948372	0.83[JPT][hapmap]
rs4948375	0.88[JPT][hapmap]
rs55958518	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56692362	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6479653	0.83[JPT][hapmap]
rs6479661	0.84[JPT][hapmap]
rs68045193	0.88[ASN][1000 genomes]
rs7079228	0.83[JPT][hapmap]
rs7079588	0.83[JPT][hapmap]
rs7088755	0.84[JPT][hapmap]
rs7092259	0.83[JPT][hapmap]
rs7895724	0.88[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs7901722	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7901952	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7910256	0.82[JPT][hapmap]
rs7916673	0.89[ASN][1000 genomes]
rs7917071	0.89[ASN][1000 genomes]
rs7920049	0.83[JPT][hapmap]
rs7920403	0.83[JPT][hapmap]
rs882896	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9664183	0.84[JPT][hapmap]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61535800-61538800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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