The 2.0 version of rSNPBase

Variant report

Variant rs11165257
Chromosome Location chr1:95302135-95302136
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95286600-95311800 Weak transcription Placenta Placenta
2 chr1:95286600-95319800 Weak transcription Lung lung
3 chr1:95287000-95306200 Weak transcription Aorta Aorta
4 chr1:95287000-95308200 Weak transcription Brain Substantia Nigra brain
5 chr1:95287000-95319800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:95287200-95302400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:95287800-95320200 Weak transcription Rectal Smooth Muscle rectum
8 chr1:95288400-95312400 Weak transcription Fetal Muscle Leg muscle
9 chr1:95289000-95306400 Weak transcription Fetal Kidney kidney
10 chr1:95289200-95314800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:95289200-95318600 Weak transcription HSMMtube muscle
12 chr1:95291400-95307000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:95293400-95306200 Weak transcription HepG2 liver
14 chr1:95293600-95308000 Weak transcription Stomach Mucosa stomach
15 chr1:95293600-95319800 Weak transcription Esophagus oesophagus
16 chr1:95293600-95320000 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:95293800-95306400 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:95294000-95320400 Weak transcription Small Intestine intestine
19 chr1:95294200-95307200 Weak transcription Fetal Muscle Trunk muscle
20 chr1:95294400-95306000 Weak transcription Gastric stomach
21 chr1:95294600-95303600 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr1:95294600-95306200 Weak transcription Colonic Mucosa Colon
23 chr1:95295200-95306000 Weak transcription Pancreas Pancrea
24 chr1:95295600-95303200 Weak transcription Duodenum Mucosa Duodenum
25 chr1:95297600-95303600 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:95298800-95308600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr1:95299200-95304000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:95299200-95305800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:95299200-95306200 Weak transcription Fetal Stomach stomach
30 chr1:95299200-95312800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:95299400-95303600 Weak transcription Fetal Intestine Small intestine
32 chr1:95301800-95303200 Enhancers HMEC breast
33 chr1:95301800-95328600 Strong transcription Fetal Intestine Large intestine
34 chr1:95302000-95302400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:95302000-95303000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:95302000-95303200 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015