The 2.0 version of rSNPBase

Variant report

Variant rs12057287
Chromosome Location chr1:95270404-95270405
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95251000-95271600 Weak transcription Small Intestine intestine
2 chr1:95258200-95284800 Weak transcription Gastric stomach
3 chr1:95267200-95275200 Enhancers Fetal Intestine Large intestine
4 chr1:95267400-95272600 Enhancers Fetal Muscle Leg muscle
5 chr1:95267800-95270600 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr1:95267800-95270800 Enhancers Brain Angular Gyrus brain
7 chr1:95267800-95271600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr1:95267800-95271600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:95267800-95271600 Weak transcription Fetal Brain Male brain
10 chr1:95267800-95271600 Weak transcription HUVEC blood vessel
11 chr1:95267800-95271800 Enhancers Rectal Mucosa Donor 29 rectum
12 chr1:95267800-95272000 Weak transcription Primary T cells from cord blood blood
13 chr1:95267800-95272200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr1:95268000-95271600 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:95268000-95271600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:95268000-95271800 Weak transcription Primary B cells from cord blood blood
17 chr1:95268000-95272000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:95268200-95271400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:95268200-95271600 Weak transcription Primary monocytes fromperipheralblood blood
20 chr1:95268200-95271600 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr1:95268200-95271600 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr1:95268200-95271600 Weak transcription NHEK skin
23 chr1:95268200-95271800 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr1:95268200-95272200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr1:95268200-95272400 Enhancers Brain Hippocampus Middle brain
26 chr1:95268200-95273800 Weak transcription H1 Cell Line embryonic stem cell
27 chr1:95268200-95274200 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr1:95268200-95276800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr1:95268200-95285000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:95268400-95272600 Weak transcription Dnd41 blood
31 chr1:95269000-95273800 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr1:95269000-95282400 Weak transcription Right Atrium heart
33 chr1:95269200-95271600 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr1:95269400-95271200 Enhancers HepG2 liver
35 chr1:95269400-95271600 Weak transcription Fetal Brain Female brain
36 chr1:95269400-95271800 Weak transcription Primary hematopoietic stem cells blood
37 chr1:95269600-95271200 Enhancers Brain Cingulate Gyrus brain
38 chr1:95269600-95271600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:95269600-95271600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:95269600-95271600 Weak transcription NH-A brain
41 chr1:95269600-95271600 Weak transcription NHDF-Ad bronchial
42 chr1:95269600-95271800 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:95269600-95271800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:95269600-95271800 Weak transcription HSMM muscle
45 chr1:95269600-95272000 Weak transcription Duodenum Mucosa Duodenum
46 chr1:95269600-95272000 Weak transcription Ovary ovary
47 chr1:95269600-95272200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:95269800-95271600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:95269800-95271600 Weak transcription Fetal Thymus thymus
50 chr1:95269800-95271800 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015