The 2.0 version of rSNPBase

Variant report

Variant rs12078728
Chromosome Location chr1:95206635-95206636
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95186200-95211400 Weak transcription Gastric stomach
2 chr1:95200200-95210200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:95201400-95211400 Weak transcription Pancreas Pancrea
4 chr1:95201400-95211400 Weak transcription Spleen Spleen
5 chr1:95201400-95212600 Weak transcription Right Atrium heart
6 chr1:95201600-95207600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:95201600-95209000 Weak transcription Fetal Muscle Leg muscle
8 chr1:95201600-95209600 Weak transcription Fetal Kidney kidney
9 chr1:95201800-95207000 Weak transcription Primary hematopoietic stem cells blood
10 chr1:95203000-95212600 Weak transcription Ovary ovary
11 chr1:95203200-95209400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:95203200-95210000 Weak transcription Left Ventricle heart
13 chr1:95203200-95212200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:95203400-95206800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:95203400-95208800 Weak transcription Dnd41 blood
16 chr1:95203400-95211400 Weak transcription Stomach Mucosa stomach
17 chr1:95203400-95212000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:95203600-95208600 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr1:95203800-95208600 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:95203800-95210000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:95204000-95210200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:95204400-95207400 Enhancers NHEK skin
23 chr1:95204800-95207400 Enhancers NHDF-Ad bronchial
24 chr1:95204800-95207600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:95204800-95207600 Enhancers NH-A brain
26 chr1:95205400-95210000 Weak transcription Lung lung
27 chr1:95205600-95206800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:95205600-95209200 Weak transcription Colon Smooth Muscle Colon
29 chr1:95205600-95211400 Weak transcription Placenta Placenta
30 chr1:95205800-95207000 Weak transcription Primary monocytes fromperipheralblood blood
31 chr1:95205800-95207200 Weak transcription Adipose Nuclei Adipose
32 chr1:95205800-95207200 Weak transcription NHLF lung
33 chr1:95205800-95207800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:95205800-95209600 Weak transcription Fetal Intestine Small intestine
35 chr1:95205800-95210000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:95205800-95212600 Weak transcription Placenta Amnion Placenta Amnion
37 chr1:95206000-95207200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:95206000-95207200 Weak transcription HMEC breast
39 chr1:95206000-95207400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:95206000-95207400 Weak transcription HSMMtube muscle
41 chr1:95206000-95208600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:95206000-95209000 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr1:95206000-95209400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:95206000-95212600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:95206000-95214600 Weak transcription Fetal Intestine Large intestine
46 chr1:95206200-95216600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:95206400-95206800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:95206400-95206800 Weak transcription HSMM muscle
49 chr1:95206400-95206800 Enhancers Monocytes-CD14+_RO01746 blood
50 chr1:95206400-95207600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015