The 2.0 version of rSNPBase

Variant report

Variant rs3916208
Chromosome Location chr1:95260884-95260885
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95242600-95268000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:95243200-95265000 Weak transcription Fetal Intestine Large intestine
3 chr1:95251000-95271600 Weak transcription Small Intestine intestine
4 chr1:95255600-95261000 Enhancers Primary neutrophils fromperipheralblood blood
5 chr1:95256000-95264800 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr1:95256800-95265800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:95257000-95261600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:95257400-95262000 Enhancers Primary B cells from peripheral blood blood
9 chr1:95258200-95267800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:95258200-95284800 Weak transcription Gastric stomach
11 chr1:95258400-95261200 Weak transcription Pancreas Pancrea
12 chr1:95258600-95261000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:95259000-95262200 Enhancers HUVEC blood vessel
14 chr1:95259200-95261400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr1:95259200-95263000 Weak transcription Fetal Lung lung
16 chr1:95259200-95263800 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr1:95259200-95264800 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:95259200-95266600 Weak transcription A549 lung
19 chr1:95259200-95267400 Weak transcription Fetal Muscle Leg muscle
20 chr1:95259400-95262200 Weak transcription Placenta Placenta
21 chr1:95259400-95263200 Weak transcription Brain Hippocampus Middle brain
22 chr1:95259400-95264200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:95259400-95264600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:95259400-95264600 Weak transcription NH-A brain
25 chr1:95259400-95264800 Weak transcription Fetal Intestine Small intestine
26 chr1:95259400-95266400 Weak transcription Colon Smooth Muscle Colon
27 chr1:95259400-95267000 Weak transcription Fetal Stomach stomach
28 chr1:95259400-95267200 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr1:95259400-95267200 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:95259400-95267200 Weak transcription Stomach Mucosa stomach
31 chr1:95259400-95267200 Weak transcription HSMMtube muscle
32 chr1:95259600-95261600 Weak transcription Ovary ovary
33 chr1:95259600-95262400 Weak transcription NHLF lung
34 chr1:95259600-95262800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:95259600-95263800 Weak transcription HMEC breast
36 chr1:95259600-95264200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:95259600-95264600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:95259600-95264600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:95259600-95264600 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:95259600-95265600 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:95259600-95267200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:95259600-95267200 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr1:95259600-95267800 Weak transcription Left Ventricle heart
44 chr1:95259800-95261800 Enhancers Primary B cells from cord blood blood
45 chr1:95260000-95262000 Enhancers Adipose Nuclei Adipose
46 chr1:95260200-95263000 Enhancers Primary monocytes fromperipheralblood blood
47 chr1:95260600-95261200 Enhancers Monocytes-CD14+_RO01746 blood
48 chr1:95260600-95261800 Enhancers Spleen Spleen
49 chr1:95260800-95261000 Enhancers Primary hematopoietic stem cells blood
50 chr1:95260800-95261200 Enhancers Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015