Variant report

Variant	rs11186605
Chromosome Location	chr10:93292740-93292741
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 93 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:93)

rs_ID	r²[population]
rs11186560	0.80[ASN][1000 genomes]
rs11186565	0.82[ASN][1000 genomes]
rs11186567	0.84[ASN][1000 genomes]
rs11186570	0.84[ASN][1000 genomes]
rs11186573	0.89[ASN][1000 genomes]
rs11186574	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11186575	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11186580	0.89[ASN][1000 genomes]
rs11186584	0.89[ASN][1000 genomes]
rs11186585	0.89[ASN][1000 genomes]
rs11186586	0.89[ASN][1000 genomes]
rs11186595	0.89[ASN][1000 genomes]
rs11186596	0.89[ASN][1000 genomes]
rs11186597	0.89[ASN][1000 genomes]
rs11186604	0.91[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs11186606	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11186607	0.93[ASN][1000 genomes]
rs12240706	0.80[ASN][1000 genomes]
rs12242257	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12242663	0.89[ASN][1000 genomes]
rs12242821	0.80[ASN][1000 genomes]
rs12244155	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12245101	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12247442	0.89[ASN][1000 genomes]
rs12249854	0.84[ASN][1000 genomes]
rs12250037	0.84[ASN][1000 genomes]
rs12253137	0.80[ASN][1000 genomes]
rs12253556	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12257663	0.89[ASN][1000 genomes]
rs12258185	0.84[ASN][1000 genomes]
rs12258439	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12259631	0.89[ASN][1000 genomes]
rs12259834	0.89[ASN][1000 genomes]
rs12261527	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12262057	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12263089	0.84[ASN][1000 genomes]
rs12265269	0.89[ASN][1000 genomes]
rs12266112	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12268013	0.80[ASN][1000 genomes]
rs12269643	0.84[ASN][1000 genomes]
rs1329652	0.89[ASN][1000 genomes]
rs13376715	0.89[ASN][1000 genomes]
rs13376868	0.84[ASN][1000 genomes]
rs1360187	0.89[ASN][1000 genomes]
rs17106657	0.84[ASN][1000 genomes]
rs2068866	0.89[ASN][1000 genomes]
rs2421517	0.89[ASN][1000 genomes]
rs4376822	0.89[ASN][1000 genomes]
rs4415665	0.84[ASN][1000 genomes]
rs55718133	0.80[ASN][1000 genomes]
rs56097320	0.84[ASN][1000 genomes]
rs57159565	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57314370	0.86[ASN][1000 genomes]
rs57988119	0.89[ASN][1000 genomes]
rs59198703	0.89[ASN][1000 genomes]
rs59758370	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61346715	0.82[AMR][1000 genomes]
rs61579794	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6583775	0.89[ASN][1000 genomes]
rs6583776	0.89[ASN][1000 genomes]
rs6583777	0.89[ASN][1000 genomes]
rs7072087	0.89[ASN][1000 genomes]
rs7074559	0.89[ASN][1000 genomes]
rs7075344	0.89[ASN][1000 genomes]
rs7075424	0.89[ASN][1000 genomes]
rs7076784	0.84[ASN][1000 genomes]
rs7077014	0.84[ASN][1000 genomes]
rs7085276	0.89[ASN][1000 genomes]
rs7100516	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73316216	0.80[ASN][1000 genomes]
rs73316246	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73316284	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73318211	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7342052	0.84[ASN][1000 genomes]
rs7478184	0.89[ASN][1000 genomes]
rs7894248	0.89[ASN][1000 genomes]
rs7895666	0.89[ASN][1000 genomes]
rs7898769	0.80[ASN][1000 genomes]
rs7898845	0.89[ASN][1000 genomes]
rs7904917	0.80[ASN][1000 genomes]
rs7906306	0.84[ASN][1000 genomes]
rs7907010	0.89[ASN][1000 genomes]
rs7908457	0.89[ASN][1000 genomes]
rs7908769	0.84[ASN][1000 genomes]
rs7910115	0.84[ASN][1000 genomes]
rs7914133	0.89[ASN][1000 genomes]
rs7914794	0.89[ASN][1000 genomes]
rs7916523	0.80[ASN][1000 genomes]
rs7919797	0.84[ASN][1000 genomes]
rs7920553	0.89[ASN][1000 genomes]
rs7920604	0.89[ASN][1000 genomes]
rs9804186	0.84[ASN][1000 genomes]
rs9943307	0.84[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93272200-93296000	Weak transcription	HSMMtube	muscle
2	chr10:93278200-93296000	Weak transcription	HSMM	muscle
3	chr10:93278400-93298400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr10:93288600-93296000	Weak transcription	Right Atrium	heart
5	chr10:93289400-93296000	Weak transcription	Liver	Liver
6	chr10:93289600-93296000	Weak transcription	Aorta	Aorta
7	chr10:93290000-93296000	Weak transcription	Pancreas	Pancrea
8	chr10:93290000-93296200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr10:93290800-93297000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links