The 2.0 version of rSNPBase

Variant report

Variant rs11227697
Chromosome Location chr11:66895174-66895175
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:66887800-66899600 Weak transcription Spleen Spleen
2 chr11:66888600-66922600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr11:66888800-66897600 Weak transcription Stomach Mucosa stomach
4 chr11:66888800-66898600 Weak transcription Gastric stomach
5 chr11:66888800-66902200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr11:66888800-66907400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr11:66889000-66895600 Weak transcription Right Ventricle heart
8 chr11:66889000-66899400 Weak transcription H9 Cell Line embryonic stem cell
9 chr11:66889000-66900000 Weak transcription Placenta Amnion Placenta Amnion
10 chr11:66889000-66901800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr11:66889000-66920400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr11:66889200-66899200 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr11:66889200-66901600 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr11:66889600-66896200 Weak transcription NH-A brain
15 chr11:66889600-66899200 Weak transcription NHDF-Ad bronchial
16 chr11:66889600-66899400 Weak transcription H1 Cell Line embryonic stem cell
17 chr11:66889600-66899800 Weak transcription Colonic Mucosa Colon
18 chr11:66889800-66895400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr11:66889800-66896000 Weak transcription Fetal Brain Female brain
20 chr11:66889800-66896000 Weak transcription HMEC breast
21 chr11:66889800-66896200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr11:66889800-66896200 Weak transcription Fetal Kidney kidney
23 chr11:66889800-66896200 Weak transcription K562 blood
24 chr11:66889800-66899200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr11:66889800-66899200 Weak transcription Brain Hippocampus Middle brain
26 chr11:66889800-66900000 Weak transcription Rectal Smooth Muscle rectum
27 chr11:66889800-66901400 Weak transcription A549 lung
28 chr11:66889800-66902000 Weak transcription HUVEC blood vessel
29 chr11:66889800-66902200 Weak transcription Aorta Aorta
30 chr11:66889800-66902400 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr11:66889800-66903800 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr11:66889800-66923400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr11:66890000-66896200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr11:66890000-66896200 Weak transcription Brain Inferior Temporal Lobe brain
35 chr11:66890000-66898000 Weak transcription HSMM muscle
36 chr11:66890000-66898400 Weak transcription Small Intestine intestine
37 chr11:66890000-66898800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr11:66890000-66901400 Weak transcription Brain Cingulate Gyrus brain
39 chr11:66890000-66901600 Weak transcription HSMMtube muscle
40 chr11:66890000-66908400 Strong transcription Fetal Stomach stomach
41 chr11:66890000-66912800 Weak transcription Psoas Muscle Psoas
42 chr11:66890200-66896200 Weak transcription Primary hematopoietic stem cells blood
43 chr11:66890200-66899600 Weak transcription Ovary ovary
44 chr11:66890200-66920000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr11:66890400-66909400 Strong transcription Fetal Muscle Trunk muscle
46 chr11:66890600-66896800 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr11:66890800-66896000 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr11:66890800-66896600 Strong transcription Fetal Intestine Large intestine
49 chr11:66890800-66897800 Strong transcription Fetal Intestine Small intestine
50 chr11:66890800-66900200 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015